Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1286 |
Symbol | |
ID | 4017573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1507007 |
End bp | 1508002 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637955282 |
Product | polysaccharide biosynthesis protein CapD |
Protein accession | YP_562295 |
Protein GI | 91792644 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
TIGRFAM ID | [TIGR03589] UDP-N-acetylglucosamine 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATA ACAAATCAAT ACTCATTACG GGCGGCACTG GGTCATTTGG TCATAAGTAT ACAAAAACCA TACTCGAGCG CTATAAGCCC AAGCGATTGA TCATCTTGTC TCGAGATGAA TTAAAGCAAT ATGAAATGCA ACAGAAGTTC AACGTTCCCT GTATGCGATA TTTTCTCGGT GATGTTCGGG ATGGTGACCG TATGGAACAA GCCTTTCGTG ATGTGGATTA TGTCATACAT GCTGCGGCAA TTAAGCAAGT GCCTGCGGCC GAATACAACC CCATGGAATG TATAAAAACA AATATTTACG GCGCTGAAAA TGTCATAAAG GCTGCGATTT CCAATAAAGT CACCCGAGTG ATTGCGTTAT CGACAGACAA AGCGGCGAAC CCAATAAATT TATATGGCGC AACCAAATTG GCTTCGGATA AGTTATTTGT TGCTGCCAAC AATATGGTGG GCGAGGGTAA AACACGTTTT TCAGTAGTGC GTTATGGTAA TGTTGTTGGC TCTCGTGGTT CTGTGGTGCC TTTCTTTAAG TCGTTAATCG AAAGCGGCGC GGCGTCATTA CCTATCACTC ACGAAGAGAT GACCCGGTTT TGGATCACCT TGCAAGATGG TGTCGACTTT GTGTTAAAAA ACTTCAGCCG TATGCAGGGA GGAGAAATTT TTGTGCCTAA AATTCCCTCT GTACGTATTA CTGAGTTAGC CTCCGCCTAC GGCCCTTCAT TAAAACAAGA GATTATAGGA ATAAGGCCTG GTGAGAAGCT GCATGAGATC ATGTGCCCTC GCGATGACTC ACACCATACT ATTGAGTTTG ACGATCACTA TGTGATCACG CCTAGCATTA CCTTTTTTGG TAAAGAACAT AATTATCATA CTAATCTCTT GGGTGAGGTC GGCAATCTGG TAGAGATGGG GTTTGAGTAT AACTCTGGAA ATAACGGACA TTTCTTAACC CAAGCTGAGA TCACAGCAAT GGACAAAAAC GCATGA
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Protein sequence | MFDNKSILIT GGTGSFGHKY TKTILERYKP KRLIILSRDE LKQYEMQQKF NVPCMRYFLG DVRDGDRMEQ AFRDVDYVIH AAAIKQVPAA EYNPMECIKT NIYGAENVIK AAISNKVTRV IALSTDKAAN PINLYGATKL ASDKLFVAAN NMVGEGKTRF SVVRYGNVVG SRGSVVPFFK SLIESGAASL PITHEEMTRF WITLQDGVDF VLKNFSRMQG GEIFVPKIPS VRITELASAY GPSLKQEIIG IRPGEKLHEI MCPRDDSHHT IEFDDHYVIT PSITFFGKEH NYHTNLLGEV GNLVEMGFEY NSGNNGHFLT QAEITAMDKN A
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