| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1268 |
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| Symbol | xseA |
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| ID | 4017536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1479711 |
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| End bp | 1481051 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637955264 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_562277 |
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| Protein GI | 91792626 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000016399 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCCG CTAAAAACAA TGTTTATACC GTATCACGGC TCAATGGCGA AGTTCGGCAA
ATTCTCGAGG GTCAGATTGG TAAAATCTGG CTCAATGGCG AAATCTCAAA TTTTTCATCC
CCAAGTTCCG GCCACTGGTA TTTGACCCTA AAAGACACCC ATTCACAAAT TCGCTGCGCC
ATGTTTAAAG GCAGAAATCA AAGTGTCAAT TTCAGGCCAG TTAACGGCCA ACAAGTATTA
GTCAAAGGGG CCATTAGCGT CTATGAGCCT AGAGGCGATT ATCAGCTGCT GCTGGAATCC
ATGTTGCCTG CCGGAGACGG TCTACTGGCC CAAGAATATG AAGCGTTGAA AATGAAGCTG
GCAGCAGAAG GCTTATTTGC CAGTGAGACC AAACGGGCCT TGCCCAGTAA TATTCAGCGC
ATCGGCATTA TCACCTCTGC AACAGGGGCC GCATTACGAG ACGTGCTGCA TGTACTGCAG
CGCCGGGATG CCTCCATCGA AGTGGTGGTC TACCCCACCC AAGTGCAAGG CACCAGCGCC
AGTGACAACA TCTGCCGCGC CATCGAGCTT GCCAATAAGC GTTTAGAAGT CGATGTGTTA
TTACTGACCC GAGGCGGCGG TTCACTGGAA GATCTATGGT GTTTTAACAA TGAAATGCTG
GCCCACAGCA TTTATAACTC AGCCCTGCCT GTGGTGAGCG CCGTTGGTCA TGAAGTGGAT
ACCACCATCA GTGATTATGT TGCCGATGTA CGCGCCCCTA CCCCCTCTGC TGGCGCTGAG
TTGTTATCTC AGGATAAGGG CAATAAAGCG CAGAAGTTAG CCTTGATGTT ATCTCGTTTA
GCCCAAGGCA TGCGCCATTA TCAATTAAGC CAAGACAAGC ATTTTGTCAA CTTGCAACAC
AGACTCAATC AGCAAGATCC CAAACGCCGT CTGCAACAAC TTGAGCAGCA ATTCGATGAG
TTTCAATTGC GCCTAGACAA TGCCTTCAAA CATAGACTGA GTCGCCTCAC ACTGCGCCAT
GAACGCTTGA GCGCCCAATT GCAGCGCCAA TCCCCTGAAC ATAAATTACG ATTGGCTCAT
CAAGCGTTAA CTCATGTCAG TGGCCGCTTT GATGACGCCA TCAAAGACAC CCTAGGCAGC
GCTGAGCAGC GGCTAAAGCA AGCCGTTCAC CAATTGGAAG CCATGAGTCC GCTTGCGACC
TTAAGCCGCG GCTATTCAAT CAGCAGTAAC GCCAACGGCA AAGTGATAAC AGATGCCAGT
AAGGTGAAAG TCGGTGACAG CCTGCACACC CGTCTAGCCA AAGGGCAACT GGTGTCAACC
GTGATAGACG TTGAGATGTA A
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| Protein sequence | MKAAKNNVYT VSRLNGEVRQ ILEGQIGKIW LNGEISNFSS PSSGHWYLTL KDTHSQIRCA
MFKGRNQSVN FRPVNGQQVL VKGAISVYEP RGDYQLLLES MLPAGDGLLA QEYEALKMKL
AAEGLFASET KRALPSNIQR IGIITSATGA ALRDVLHVLQ RRDASIEVVV YPTQVQGTSA
SDNICRAIEL ANKRLEVDVL LLTRGGGSLE DLWCFNNEML AHSIYNSALP VVSAVGHEVD
TTISDYVADV RAPTPSAGAE LLSQDKGNKA QKLALMLSRL AQGMRHYQLS QDKHFVNLQH
RLNQQDPKRR LQQLEQQFDE FQLRLDNAFK HRLSRLTLRH ERLSAQLQRQ SPEHKLRLAH
QALTHVSGRF DDAIKDTLGS AEQRLKQAVH QLEAMSPLAT LSRGYSISSN ANGKVITDAS
KVKVGDSLHT RLAKGQLVST VIDVEM
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