| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1257 |
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| Symbol | hisS |
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| ID | 4017472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1468022 |
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| End bp | 1469296 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955253 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_562266 |
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| Protein GI | 91792615 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0282832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTAAGC AGATCCAAGC AATTCGCGGA ATGAATGACA TTCTGCCCAC CCAAAGCCCT
CTATGGCAAA AAGTAGAAGC CGTTTTGCGT TCATCTGTGA GTGCTTATGG TTACAGCGAA
ATTCGCACTC CAATCGTAGA AAGTACCGAT CTTTTTAAAC GCTCTATTGG TGAAGTTACT
GATATTGTTG AAAAAGAAAT GTACACTTTC GAAGACAGAA ACAGCGACAG TTTAACCTTG
CGGCCTGAAG GCACGGCTTC GACAGTGCGA GCAGGTAACG AACATGGCTT ACTCTATAAC
CAAGAGCAGC GTTTGTGGTA CATGGGTCCT ATGTTTCGTC ATGAACGCCC TCAAAAAGGC
CGCTACCGTC AATTTCATCA GTTTGGTGTT GAAGTCTATG GTATAGGCAC TGCGGATATT
GACGCTGAAG TCTTGATGCT GTCGGCGCGT TTATGGCAAC AGCTTGGCAT TGATGAGCAT
GTGAGTCTCG AGCTTAACAC CCTTGGGGAT CCTAGCGAAC GCGCGGCCTA TCGTGATGCG
TTAATTGCTT TCCTTGAGCA ACACAAGGAC AAGCTGGATG AAGACAGTCA GCGCAGAATG
TATTCTAATC CACTGCGTGT CCTAGACACT AAAGACAGCC AAGTGCAAGC TCTGCTTGCC
GATGCACCGG CTTTGATGGA TTACTTAGGC GAAGAGTCGA AAACACATTT TTCAACCTTA
TGTGAACTCT TGGACGCCGT TGGCATCCAA TACCGAGTTA ATCCGCGTTT AGTGCGCGGC
TTAGATTATT ATAATCGCAC CGTGTTTGAA TGGGTCACGA CGAGCCTGGG CTCTCAGGGG
ACTGTGCTTG CCGGTGGTCG TTATGATGGT CTAGTGGGGC AGTTGGGCGG GAAAGACACG
CCTGCTGTGG GTTTTGCCAT GGGGCTTGAG CGAATCGTAT TATTGCTTGA AACCTTAGGG
CTTAACCAAG ATATCGCTCC TGAAGTGGAT GTGTATGTGA CCGCCATGGG GGATTCATGC
TTAGTTGAAG CCTTTAAAGT TGCCCAAGAA TTACGTCAGG CTTTGCCTGG ACTTAAAGTC
ATGAGTCATT GTGGTGGTGG TAACGTTAAG AAGCAGATGA AGCGTGCGGA TAAGAGCGGC
GCCGCTTATG CCATCATAAT CGGTGAAAAT GAGCTTGCCA ATAATCAAGT GGCCATCAAA
CCGTTACGAA ATAATAACCA ACAAGAATTA GTTGCCAGAG ACGCTCTGGC TGAAACCATT
TCAGCATTGA TTTAA
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| Protein sequence | MAKQIQAIRG MNDILPTQSP LWQKVEAVLR SSVSAYGYSE IRTPIVESTD LFKRSIGEVT
DIVEKEMYTF EDRNSDSLTL RPEGTASTVR AGNEHGLLYN QEQRLWYMGP MFRHERPQKG
RYRQFHQFGV EVYGIGTADI DAEVLMLSAR LWQQLGIDEH VSLELNTLGD PSERAAYRDA
LIAFLEQHKD KLDEDSQRRM YSNPLRVLDT KDSQVQALLA DAPALMDYLG EESKTHFSTL
CELLDAVGIQ YRVNPRLVRG LDYYNRTVFE WVTTSLGSQG TVLAGGRYDG LVGQLGGKDT
PAVGFAMGLE RIVLLLETLG LNQDIAPEVD VYVTAMGDSC LVEAFKVAQE LRQALPGLKV
MSHCGGGNVK KQMKRADKSG AAYAIIIGEN ELANNQVAIK PLRNNNQQEL VARDALAETI
SALI
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