Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1224 |
Symbol | |
ID | 4017273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1428343 |
End bp | 1428834 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637955220 |
Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
Protein accession | YP_562233 |
Protein GI | 91792582 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCCC AAGTTGCAAT CGTTATGGGT TCTAAGAGTG ATTGGCCGAC CATGGAAGCC GCTGCCGATA TTTTAGATTT ACTGCAAGTG CCCTACCATG TGGAAGTTGT CTCGGCGCAC CGCACTCCGG ATAAGTTAAT GGAATTTGCC AGTGCCGCAG TAAAGTCCGG CTTTAAAATT ATCATAGGCG GCGCTGGCGG CGCGGCTCAT CTACCAGGCA TGATTGCCGC TAAGACTCGC CTTCCTGTAC TCGGGGTACC CGTGCAAAGT AAAGCCCTGT CAGGCATGGA CAGCTTATTA TCCATAGTAC AAATGCCTAA AGGCATAGCC GTTGGCACAC TGGCTATTGG CACAGCTGGG GCGTTTAACG CCGGATTACT CGCCGCACAA ATGTTGGCAA ACCATGATGC ACAGCTTGCG GCACGTCTTG ATGCCTTTAG AGAGCAACAA ACCCGCACCG TATTAGAGAA TCCCGATCCG AGAGTCGATT AA
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Protein sequence | MSAQVAIVMG SKSDWPTMEA AADILDLLQV PYHVEVVSAH RTPDKLMEFA SAAVKSGFKI IIGGAGGAAH LPGMIAAKTR LPVLGVPVQS KALSGMDSLL SIVQMPKGIA VGTLAIGTAG AFNAGLLAAQ MLANHDAQLA ARLDAFREQQ TRTVLENPDP RVD
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