Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1219 |
Symbol | |
ID | 4017485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1422934 |
End bp | 1424508 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637955215 |
Product | glutamate--cysteine ligase |
Protein accession | YP_562228 |
Protein GI | 91792577 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATTCA ATAACACTGT CGACCAACTC AGTGATGCAC AGGGCCGTGA AGCCTTATTA GGTATGTTTC GCGGCATAGA GCGTGAAGCA CTGCGTATTG GTACCGATGG TCAGCTAGCC ACAGACCCCC ATCCTAACGC ATTAGGTTCG GCATTAACCC ATTCTCGGAT CACCACAGAT TACAGCGAAT CCTTGCTCGA ATTTATTACT CCTGTCCATC AAAGCATAGA TGCACTATTA GAAGATCTCA CTCAGACTCA TGCCTTTAGT GTGCGTAACC TTAACGGTCA GAAATTATGG CCTGTGAGCA TGCCTTGTTA TGTGGGTGAT GAGAAAAATA TTCCCATAGC CCAATATGGC AGCTCAAATA CCGGTATGAT GAAAACCTTA TATCGTAAGG GCCTAACTCA TAGATACGGC GCATTAATGC AGATAATTTC TGGGGTTCAT TTTAATTTTT CTGTGTCTAA TGAGCTGTGG CAGCGCCTCT ATGAACTTAG CGACACTAAG CTTGGACTCA ATGATTTTAT TTCAGAATCC TATTTCGGTT TGATCCGCAA TTATCGCCGT TTGGTGTGGG TGTTACCCTA CCTTTTTGGT TCATCTCCGG CCATATGCAG CTCTTTCATT AAGGATCAAG AATTCGATTT TGAGTTTATG AAGACCGGTA AAGGCACCTT GTATTTACCC TATGCCACCT CATTGCGTAT GAGCGACTTA GGCTATACCA ACAAAGAGCA AGATACCCTT AATATTAGCT ATAACTCTTT ACCTGAATAC TTAACTGGCA TTCGTGCGGC GATTAAGATG CCCTCGAAGA AATTCGAAAA AATTGGCGTC AAAGTCGATA ACGAATATCA GCAGCTCAAT AGCAACATTT TACAAATCGA GAATGAGTTC TACTCGCCTA TTCGTGCTAA ACGCGTTACT AAACGGGGTG AAAAACCTTC AGATGCGCTG TCTCGTGCTG GGGTTGAGTA CATAGAAGTC AGGGCACTGG ACGTGAATCC ATTTAGCCCA GTTGGCATAG ATGCAAACCA AGTGCGCTTC TTGGATTTAT TCTTACTGCA TTGCCTGCTA AGTCCATCAG CGCCAAGTTA TGGCGAAGAA GAAGGTGAAA TGACTGCCAA TTTAAAGGCA GTGGTACTCG AAGGTCGTAA ACCTGGACTT GAGCTCACTA AAGCCGGTGA ACCTATCTCT ATGTCAATCT GGTTACAGCA GCTATTCGAT GCTTTAGTTC CCTTAGCAAA ACTGCTGGAT GGTGAGCATG AATATGCGTA TCAGACCGCA TTATCGACCT GGGAAAAAAC CATTGCGGAT CCCACTAAGA CGCTGTCGGG TCGCGTCTTG GATGAAATCA TCACCAAGGG CACAGATCAT TTCAGTTGGG TGAAAACCTT AGCTGAGGAT TACCACAGTT TCTTGAGCCA ATATCCGTTA TCTAATGAAG TGACTGAGCG CTACAAAACA GACGCTACAT CATCCCTTGT GGCTCAACGG GAGCTAGAGG CCAGTTCAAA CCAACCCTTT AGTGCCTATT TAGATGACTA TTTCTCAATG TCAGACAAGG CATAG
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Protein sequence | MSFNNTVDQL SDAQGREALL GMFRGIEREA LRIGTDGQLA TDPHPNALGS ALTHSRITTD YSESLLEFIT PVHQSIDALL EDLTQTHAFS VRNLNGQKLW PVSMPCYVGD EKNIPIAQYG SSNTGMMKTL YRKGLTHRYG ALMQIISGVH FNFSVSNELW QRLYELSDTK LGLNDFISES YFGLIRNYRR LVWVLPYLFG SSPAICSSFI KDQEFDFEFM KTGKGTLYLP YATSLRMSDL GYTNKEQDTL NISYNSLPEY LTGIRAAIKM PSKKFEKIGV KVDNEYQQLN SNILQIENEF YSPIRAKRVT KRGEKPSDAL SRAGVEYIEV RALDVNPFSP VGIDANQVRF LDLFLLHCLL SPSAPSYGEE EGEMTANLKA VVLEGRKPGL ELTKAGEPIS MSIWLQQLFD ALVPLAKLLD GEHEYAYQTA LSTWEKTIAD PTKTLSGRVL DEIITKGTDH FSWVKTLAED YHSFLSQYPL SNEVTERYKT DATSSLVAQR ELEASSNQPF SAYLDDYFSM SDKA
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