Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1210 |
Symbol | |
ID | 4017733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1408500 |
End bp | 1409555 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637955200 |
Product | histidine kinase internal region |
Protein accession | YP_562219 |
Protein GI | 91792568 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAA ATCATAAGAA AACTATGAAA AAACATACCA CTAAGTTACT CAACATCTTG GCTGTATTAG GCCTAACCCA CTTAGTGGTA TTTTATACCG CCATGGCACA AACCTCTGGC GGTGAGCCGT TAAACTATCA CCCAGATGGC CCATTTTGGC TGGCGTTGCA ATGTTTTCTC GCTCAGTGGA TCACCTATCG AAGCTATAAA CATTTAGTAA AAGGGCAATT GATTAGCATT AATGCCATTG CCCAAGTTTA CTTCAGTAGC GCGGCCCTGT TTATCGCATT AAATAGCAGC TTAGTCTTAG GGCTAGAATG GACCATAGGC ATAGAATACC TAGACATTCG CCATATCGCC TTAACCATCA TTTTAAGTGT TTTACTGCAT CTATTATTAG GCGGAACCTT GTTGGCCGCA CTGTTGTTTA ATGAAGTGAG GCAGCAACAA CTCGCCCATA TTCAAACACA AAATCAGCTA GCTAACAGCC AGATAAGTGC TTTACAGCAA CAACTTGACC CACACTTTTT ATTCAACAAC CTTAATGTAT TATCAGTACT CATTCAGCAA GACCCAGATG AAGCCGATGA TTTCCTCGAT GCCTTCTGCA GTCTGTATCG CTACATGCTT GAAGCCCATA AAAATCGACT CATTAGTCTT GAAAAAGAAC TCGAGTTTGC TGACAGTTAT CTGCACTTAT TAGCGAAACG CTTCCCAAAA GCGTTCACTT TCGAACTTGC GCTAACACTG GATCCTAAAC AGGTGCAGCT CGTCCCCGGC GCTTTACAAT TGGCGTTAGA GAATATCGTC AAACACAATC AGGCAAGTCA AGCCCAGCCA GTGCGTATCA CAATCACCAA CCAAGGCGAA CGTTTATTGG TGACCAATGA CTTAAGGCCT AAATCTCATA CCACACATCC AGATAGCCTT AATCTTGGGC TAAATAACTT AAATGAACGC TGCACAATGT TAGTCAACCA GTCCATTAGC ATAGAAAAAA CGGCAGAGAC CTTTAGCCTC AGCCTGCCAT TGGTGGATTT AGCTGTTAGC TGTTAG
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Protein sequence | MTQNHKKTMK KHTTKLLNIL AVLGLTHLVV FYTAMAQTSG GEPLNYHPDG PFWLALQCFL AQWITYRSYK HLVKGQLISI NAIAQVYFSS AALFIALNSS LVLGLEWTIG IEYLDIRHIA LTIILSVLLH LLLGGTLLAA LLFNEVRQQQ LAHIQTQNQL ANSQISALQQ QLDPHFLFNN LNVLSVLIQQ DPDEADDFLD AFCSLYRYML EAHKNRLISL EKELEFADSY LHLLAKRFPK AFTFELALTL DPKQVQLVPG ALQLALENIV KHNQASQAQP VRITITNQGE RLLVTNDLRP KSHTTHPDSL NLGLNNLNER CTMLVNQSIS IEKTAETFSL SLPLVDLAVS C
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