| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1191 |
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| Symbol | |
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| ID | 4017676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1383288 |
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| End bp | 1386140 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955181 |
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| Product | hybrid sensory histidine kinase BarA |
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| Protein accession | YP_562200 |
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| Protein GI | 162210777 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000146059 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCG CTAATAATCT GACCAAATAC AGTCTGCGCT CTTGGGTCTT GGTACTGGCA
TTAGCCCCAA CCGTACTGGT CGGCATCCTA CTGGGCAGCT ATTTTACCAT AAACCGCTTT
TATGAGCTCG AAGAGACCTT GATTGCTCAA GGTCGAAGCA TAGTGGAGCC CTTAGCGATT
GCCAGCGAGT TCGGTCTATT GGCTGATAAC CGTGAAGTCA CCAAGCGTTT ACTGTCCGCA
TCTCAGCTGA GTAATTCTGC CCTTATTCGC TCCATTGCCA TCTTCGATAT TCAAAATCAT
TTGTTTGTGA CGTCCCATTA TCACAAAGAT TTCGAAAGCA TGCGTTATAA AGAAGCGCTG
GAGCGTTTAA ATCCAGATGA ATTTGAGACC TTGGAAGATT CGCTCATCAT ACGTATGCCA
ATTGTCTCAA ATACTGGCAA GGCTGGCATC AACTTATTTG CCCAAACTGG CACAGCCAGC
CCCAATGCCC ACCCAGGAAC TAGCCAGGCC GTCCCCGCAG CAAGCATGGA AACCAAAGAG
GGCCAACAAT TACTGGGCTA CATTGCCATT TTGCTCAATA AAGAGAATGC CTTATTGGAG
CAACACAGGG CCGCCATTGC CGCCTTCGTT ATTGTGCTCA TTGGGGTGCA GTTCAATTTA
TTCTTCACCT TCCGCTTAGT GAAACACGTA AACTTCCCCA TCACCGAGAT GGTGCGGGTG
GTGGCAAAAA TTCGTGAAGG CAAGTTGGAT GCTCGCTTGG ATGGCAACCT TATCGGTGAG
TTGGACTTAT TGAAACGTGG CATTAATGCC ATGGCAGGTT CTTTAAGCGA ATACCATGAT
GAAATGCAGC AGAATATCGA TCAGGCAACC TTCGATCTCA GGGAAACCTT AGAGCAGATT
GAAATACAAA ACGTCGAACT CGACTTAGCC AAGAAACGCG CCCAGGAAGC GAGCCAAATT
AAATCTGAGT TCTTGGCCAA CATGTCCCAT GAACTGCGCA CCCCTCTCAA TGGAGTAATA
GGCTTTGCAA GGCAACTGAT TAAAACCCCA CTGCATGCCA GTCAGCTGGA CTACATTAAA
ACCATCGACC GCAGCGCCAC TAACCTCCTA GGCATTATCA ACGACATTTT AGACTTCTCT
AAACTTGAAG CTGGCAAGAT GGAATTGGAA AAAATGCCTT TTTCACTGCG TGAAACTGTC
GCCGAAACCA TCACCATCAT AGCCCCTAGC GCGCAAGCTA AAGGGCTTGA GCTAGTGATA
GACATAGATG AAAATGTCCC TGAGCACGTC AGCGGCGATG CCATGCGTGT CAACCAAATC
ATCACCAACC TTGTGGGCAA TGCCATTAAG TTTACCGACT CAGGCAGTGT GGTGTTTAAA
GTAATTCTGG TGGCTGAAAC GGACGATAGA GTGACCCTGC GCTGTGAAGT CATAGACACA
GGGATTGGCA TAGATGACAG TCAGCAAGAA TACCTGTTTC AAGCCTTTGG CCAAGCCGAC
TCCTCCATAT CGCGCCGTTT TGGCGGCACC GGACTCGGTC TTGTTATCAC CAAGCGTTTG
ATCAATAAAA TGGGCGGCCA GATAGGCTTT ACCTCAAGCA GTGAAAAGGG ATCAAACTTT
TGGTTTATTC TGCCCTTAAA TTTGAGTCAA TTTCAAATCG GTGAAGTCTT ACCTATGGAC
GTGTTGCACG GCAAATCTGT GCTCCTGTAC GAGCCGCGCA CCTTAACCCG TGAGACGCTT
AACCGGCGTT TAATTTCATG GCAATTGTCA CTAACCAGTG TGTGCAGCAT AGATGAACTC
ACCCAGACCT TAGCCAAGCC CGAACCCCAT TATGATTATG CCCTTATCAG CTGCCATGGA
TTCGATACCA CCCAAGCCTT AGGCCAGCAA TTGCAACAAG CCAGATCTAA GGCCACTAGC
CTTATCCTGT TGCATGACTG CTTTGAGCAC GAAACCATGG TCAGTCAATT GCGTAACAGC
GTCGATATCT TGGTTATCAC GCCCATCAGC GATTACGCCT TGGCAAGGCA GTTGATATAC
CCACCAGCAA AAAACCTCAT CATCCCAGAG CTTGCACCAG AGCAAAGCTA TCAAAGACAA
CGCATGTCCG TGCTCGCCGT TGATGATAAT CCGGCAAACC TTATGCTTAT CGATACCTTG
CTGCAAGAAG TGGTTACCAA TGTAGTTACC GCGAGTCGAG GTGAAACTGC GGTCGAGCTT
GCCAAGGGCC AACAATTTGA TCTGATTTTC ATGGATATCC AAATGCCTGG CATAGATGGA
CTCGCGGCAA CCAGGCTTAT TCGTCAAGCC TCGATGAACC GCAACACCCC TATCATAGCG
GTCACGGCTC ACGCCTTGTC GGAAGAGAAA GAGAGTATTC TTAACAGTGG TATGGACGGT
TATTTACCTA AACCTATAGA TGAAAATTCC CTTAAGGCCG TAATTGAGCG TTGGGTCAGC
AAGCCTAAAT TTACCCATTT TGATTTACAG ACCCTAAACT GGGAAATGTG TCTCACCCAA
GTGAATCAAA AGCAAGATTT GGCCTTAGAG ATGCTCAGGA TGCTGGTTAA ATCCCTGCCT
GAGACCATAG AACACCTAGA ACACGCCTTA GAGGAACAAA GCCAAGACAA GATGCTGTAC
ACAGTTCACA AGTTGCATGG TGCGAGCCTC TACTGCGGCG TGCCTAATAC TCAGAAACTC
TGTCATGCGC TCGAGTCCTC ACTTAAGAAA TTAACGCCCA TTCTTGATCT CGAACCGGAA
ATACTAGAGT TACTTGACGA GTTAACTAAG GTAGAATCGG CAGCAAATCA AGTGATAACA
CAGCTATCAG CGGATATTAA CCATGACCAA TAA
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| Protein sequence | MKSANNLTKY SLRSWVLVLA LAPTVLVGIL LGSYFTINRF YELEETLIAQ GRSIVEPLAI
ASEFGLLADN REVTKRLLSA SQLSNSALIR SIAIFDIQNH LFVTSHYHKD FESMRYKEAL
ERLNPDEFET LEDSLIIRMP IVSNTGKAGI NLFAQTGTAS PNAHPGTSQA VPAASMETKE
GQQLLGYIAI LLNKENALLE QHRAAIAAFV IVLIGVQFNL FFTFRLVKHV NFPITEMVRV
VAKIREGKLD ARLDGNLIGE LDLLKRGINA MAGSLSEYHD EMQQNIDQAT FDLRETLEQI
EIQNVELDLA KKRAQEASQI KSEFLANMSH ELRTPLNGVI GFARQLIKTP LHASQLDYIK
TIDRSATNLL GIINDILDFS KLEAGKMELE KMPFSLRETV AETITIIAPS AQAKGLELVI
DIDENVPEHV SGDAMRVNQI ITNLVGNAIK FTDSGSVVFK VILVAETDDR VTLRCEVIDT
GIGIDDSQQE YLFQAFGQAD SSISRRFGGT GLGLVITKRL INKMGGQIGF TSSSEKGSNF
WFILPLNLSQ FQIGEVLPMD VLHGKSVLLY EPRTLTRETL NRRLISWQLS LTSVCSIDEL
TQTLAKPEPH YDYALISCHG FDTTQALGQQ LQQARSKATS LILLHDCFEH ETMVSQLRNS
VDILVITPIS DYALARQLIY PPAKNLIIPE LAPEQSYQRQ RMSVLAVDDN PANLMLIDTL
LQEVVTNVVT ASRGETAVEL AKGQQFDLIF MDIQMPGIDG LAATRLIRQA SMNRNTPIIA
VTAHALSEEK ESILNSGMDG YLPKPIDENS LKAVIERWVS KPKFTHFDLQ TLNWEMCLTQ
VNQKQDLALE MLRMLVKSLP ETIEHLEHAL EEQSQDKMLY TVHKLHGASL YCGVPNTQKL
CHALESSLKK LTPILDLEPE ILELLDELTK VESAANQVIT QLSADINHDQ
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