Gene Sden_1182 details

Gene Information

• Locus tag: Sden_1182
• Symbol: dnaK
• ID: 4017667
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1371042
• End bp: 1372958
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637955172
• Product: molecular chaperone DnaK
• Protein accession: YP_562191
• Protein GI: 91792540
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000163847
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCAAAA TTATTGGTAT CGACTTAGGC ACAACAAATT CATGTGTGGC TGTCCTTGAC 
GGCGGTAAAG CACGTGTTCT AGAAAACGCA GAGGGTGATC GCACTACGCC TTCTATCGTC 
GCTTATACCG ATGAAGAAAT CATTGTTGGC CAACCTGCAA AACGTCAGGC TGTGACTAAC 
CCCAACAACA CTTTCTTTGC CATTAAGCGT CTTATCGGTC GCCGTTTTAA AGATGACGAA 
GTTCAACGTG ACGTTGATAT CATGCCATTC AAAATTATCG GCGCTGATAA CGGTGATGCA 
TGGGTTGAGC AACGTGGTAA CAAGATGGCA CCACCACAGG TTTCTGCTGA AATCTTGAAA 
AAGATGAAGA AGACAGCTGA AGATTTCCTC GGTGAAGAAG TGACTGAAGC GGTTATTACC 
GTACCGGCTT ACTTTAACGA TTCACAGCGT CAAGCCACTA AAGATGCTGG CCGTATCGCA 
GGTCTTGAAG TTAAGCGTAT CATCAACGAG CCAACAGCGG CTGCGCTTGC TTACGGTATC 
GACAAGAAGC AAGGCGACAA TATAGTTGCA GTATACGATT TAGGTGGTGG TACATTCGAT 
ATCTCTATCA TCGAAATCGA CAGCAACGAT GGCGACCAGA CCTTTGAAGT ACTGGCCACA 
AACGGTGACA CCCACTTAGG TGGTGAAGAT TTCGATAACC GTTTAATCAA CTATTTAGCT 
GATGAATTCA AGAAAGATCA AGGTCTAGAT TTACGTAGAG ACCCGCTGGC GATGCAGCGT 
CTTAAAGAAG CGGCTGAAAA AGCAAAAATT GAACTTTCAA GCACCAACCA AACTGAAGTT 
AACTTGCCGT ACATCACTGC CGATGCATCA GGTCCTAAGC ATTTAGTGGT TAAAGTGACT 
CGTACTAAGT TAGAGTCTTT GGTTGAAGAT TTAATCCAAC GCACCTTAGA GCCACTTAAA 
GTTGCCCTTG CTGATGCTGA TTTGTCTGTT TCTGAAATCA ACGAAGTGAT TTTAGTCGGT 
GGTCAGACTC GTATGCCTAA AGTACAAGAA GCGGTAACAA ACTTCTTCGG CAAAGAGCCA 
CGCAAAGACG TTAACCCAGA TGAAGCGGTT GCTGTGGGCG CTGCAATTCA AGCTGGCGTA 
TTGTCTGGTG AAGTTAAAGA CGTATTGCTA CTTGACGTTA CACCACTATC TCTTGGTATC 
GAAACCATGG GTAGCGTAAT GACTAAGCTT ATCGACAAGA ACACCACTAT CCCGACTAAA 
GCGCAGCAAG TGTTCTCAAC GGCTGACGAT AACCAGAGCG CCGTGACCAT TCACGTGCTT 
CAAGGTGAGC GCAAGCAAGC GAGTGCTAAC AAGTCTTTAG GTCAATTCAA CCTTGAAGGT 
ATTGAGCCTG CACCACGTGG CCAACCACAA GTTGAAGTGA TGTTTGACAT CGATGCTGAC 
GGTATCTTAC ATGTGTCAGC GACTGACAAG AAAACCGGTA AGAAGCAAAA CATCACCATT 
AAAGCCTCTT CTGGTCTGTC GGATGAAGAA GTTGAACAAA TGGTACGTGA CGCTGAAGCT 
CACGCCGATG AAGACGCTAA GTTTGAAGCC TTAGTTCAAG CACGTAATCA AGCCGATGGC 
CTAGTACATG CAACTAAGAA GCAAGTGACC GAAGCTGGTG ATGCATTAGC AAGTGACGAG 
AAAGAAAAAA TCGAAGCGGC TATGGCAGCG GTTGATGAAG CGACTAAAGG CAAAGATGCT 
GAAGCCATCG AAAAAGCGAC TCAGGCGCTG ATCGAAGCCT CTGCTAAGCT GATGGAAATC 
GCTCAAGCTA AATCTCAAGC TCAAGGCGGC GAAGAAGCCC AAGCGAAAGA TGCCGGTCAA 
AGCAATGACG ACGTAGTAGA CGCTGAGTTC GAAGAAGTTA AAGACGACAA GAAGTAA 

 

Protein sequence

MGKIIGIDLG TTNSCVAVLD GGKARVLENA EGDRTTPSIV AYTDEEIIVG QPAKRQAVTN 
PNNTFFAIKR LIGRRFKDDE VQRDVDIMPF KIIGADNGDA WVEQRGNKMA PPQVSAEILK 
KMKKTAEDFL GEEVTEAVIT VPAYFNDSQR QATKDAGRIA GLEVKRIINE PTAAALAYGI 
DKKQGDNIVA VYDLGGGTFD ISIIEIDSND GDQTFEVLAT NGDTHLGGED FDNRLINYLA 
DEFKKDQGLD LRRDPLAMQR LKEAAEKAKI ELSSTNQTEV NLPYITADAS GPKHLVVKVT 
RTKLESLVED LIQRTLEPLK VALADADLSV SEINEVILVG GQTRMPKVQE AVTNFFGKEP 
RKDVNPDEAV AVGAAIQAGV LSGEVKDVLL LDVTPLSLGI ETMGSVMTKL IDKNTTIPTK 
AQQVFSTADD NQSAVTIHVL QGERKQASAN KSLGQFNLEG IEPAPRGQPQ VEVMFDIDAD 
GILHVSATDK KTGKKQNITI KASSGLSDEE VEQMVRDAEA HADEDAKFEA LVQARNQADG 
LVHATKKQVT EAGDALASDE KEKIEAAMAA VDEATKGKDA EAIEKATQAL IEASAKLMEI 
AQAKSQAQGG EEAQAKDAGQ SNDDVVDAEF EEVKDDKK