Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1080 |
Symbol | |
ID | 4016796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1235643 |
End bp | 1236227 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637955072 |
Product | hypothetical protein |
Protein accession | YP_562091 |
Protein GI | 91792440 |
COG category | [S] Function unknown |
COG ID | [COG3758] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.62386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGATCA TTCCCCCCAA TGACTTTAAA CGTCTGCCTT GGAAGAATGG CAAAGGCGAG ACCATAGAAC TTGCCATCAA TGAGGGCGGT ACAATGGCTG ACTTTGACTG GCGCATCAGT ATGGCAAAGG TCACCGAAGA TGGGCCTTTC TCGGACTTTA GTGGTTACCA ACGTCAGCTA TTGCTGCTTG AAGGTGTGGG GATCACCCTC AAGCACCAAA ACCATGATGG TCGGCATCAA TACCAGACAT TAGCCACGCC GCTGGCCGTC GCCAACTTTG ATGGCGGCCT TATGACCTCA GGTGTGTTAA TTAATGGCCC TATTAGTGAT TTTAACTTGA TAGTAAAAGC CGCTAAATAT CAGACTGACG TTCACGTATT GCAAGCCAGT ACACTTACAC TGCCTTTATC TCAGCTGCTA TTTGCCTATG CTGTCACCGG CAGTTGTGAA GTGACATTCA GCAATAACAC CATAACACTC CCCCAAGGGT ATTTAGTCAG GCTTGCAGCC GACGATTTAG CGTCCAGTAG TCCTGTTAAT TTCAGCGGTG AACGAGTCAT TATTATGAGC CTAGCCTTAT TATAA
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Protein sequence | MQIIPPNDFK RLPWKNGKGE TIELAINEGG TMADFDWRIS MAKVTEDGPF SDFSGYQRQL LLLEGVGITL KHQNHDGRHQ YQTLATPLAV ANFDGGLMTS GVLINGPISD FNLIVKAAKY QTDVHVLQAS TLTLPLSQLL FAYAVTGSCE VTFSNNTITL PQGYLVRLAA DDLASSSPVN FSGERVIIMS LALL
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