Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1005 |
Symbol | |
ID | 4016572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1144593 |
End bp | 1145048 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637954997 |
Product | hypothetical protein |
Protein accession | YP_562016 |
Protein GI | 91792365 |
COG category | [S] Function unknown |
COG ID | [COG0779] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0545714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCAACAA TAGAATCTAG ACTGGTCGAA ATGCTCACTG TGCCAGTTGA AGCCTTGGGT TTCGAGCTTT GGGGCATAGA GTTCGTTCAT GCTGGTCGTC ACTCGATAGT GCGTGTTTTT ATCGACAGTG AAAAAGGCAT ATTTATTGAA GACTGTGCCG AAACCAGTCG TCAAGTCAGT GCGGTACTGG ATGTTGAAGA CCCCATTACG ACCGAATACA CATTAGAAGT TTCTTCACCT GGTGTTGATA GGCCTTTATT TACTGCCGCG CAGTATCAGG CTTATATCGG TGAGGATGCG AAAGTTCAAT TGACTATGCC TGTTGCGGGT AGTCGTAATT TAAAAGGCGT CATCAGTAAA GTTGAAGGTC AGATCTTGAC ACTTAACGTT GATGGTAAAG ACTTGATTAT TGCCTTGGAT AATATCCGTA AAGGCAACAT TATCGCTAAG TTTTGA
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Protein sequence | MATIESRLVE MLTVPVEALG FELWGIEFVH AGRHSIVRVF IDSEKGIFIE DCAETSRQVS AVLDVEDPIT TEYTLEVSSP GVDRPLFTAA QYQAYIGEDA KVQLTMPVAG SRNLKGVISK VEGQILTLNV DGKDLIIALD NIRKGNIIAK F
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