Gene Sden_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1005 
Symbol 
ID4016572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1144593 
End bp1145048 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content43% 
IMG OID637954997 
Producthypothetical protein 
Protein accessionYP_562016 
Protein GI91792365 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0545714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAACAA TAGAATCTAG ACTGGTCGAA ATGCTCACTG TGCCAGTTGA AGCCTTGGGT 
TTCGAGCTTT GGGGCATAGA GTTCGTTCAT GCTGGTCGTC ACTCGATAGT GCGTGTTTTT
ATCGACAGTG AAAAAGGCAT ATTTATTGAA GACTGTGCCG AAACCAGTCG TCAAGTCAGT
GCGGTACTGG ATGTTGAAGA CCCCATTACG ACCGAATACA CATTAGAAGT TTCTTCACCT
GGTGTTGATA GGCCTTTATT TACTGCCGCG CAGTATCAGG CTTATATCGG TGAGGATGCG
AAAGTTCAAT TGACTATGCC TGTTGCGGGT AGTCGTAATT TAAAAGGCGT CATCAGTAAA
GTTGAAGGTC AGATCTTGAC ACTTAACGTT GATGGTAAAG ACTTGATTAT TGCCTTGGAT
AATATCCGTA AAGGCAACAT TATCGCTAAG TTTTGA
 
Protein sequence
MATIESRLVE MLTVPVEALG FELWGIEFVH AGRHSIVRVF IDSEKGIFIE DCAETSRQVS 
AVLDVEDPIT TEYTLEVSSP GVDRPLFTAA QYQAYIGEDA KVQLTMPVAG SRNLKGVISK
VEGQILTLNV DGKDLIIALD NIRKGNIIAK F