| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0998 |
|---|
| Symbol | |
|---|
| ID | 4017595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 1137462 |
|---|
| End bp | 1137761 |
|---|
| Gene Length | 300 bp |
|---|
| Protein Length | 99 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637954988 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_562009 |
|---|
| Protein GI | 91792358 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein |
|---|
| TIGRFAM ID | [TIGR00253] putative RNA-binding protein, YhbY family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000139607 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTAA CAACCAAACA AAAACAGCAT TTAAAAGGCC TGGCGCATAA TCTTAAGCCT
GTGGTCATGC TGGGTGCCAA TGGTTTGACT GAAGGTGTTC TAGCTGAAAT TGACAGCGCA
TTAACACACC ATGAACTTAT CAAAGTTAAA GTAGCTGGCG CCGACAGAGA ACTTAAAAAT
GCCATAGTCG ATGCTATCGT GCGTGAAACT CAGTCAGCTA AAGTACAAGT TATTGGTCAC
GTGTTGGTGC TTTTCCGTCA TTCTGCAGAA ATGAAAATCG CCTTACCAAA AACCAAATAA
|
|---|
| Protein sequence | MNLTTKQKQH LKGLAHNLKP VVMLGANGLT EGVLAEIDSA LTHHELIKVK VAGADRELKN
AIVDAIVRET QSAKVQVIGH VLVLFRHSAE MKIALPKTK
|
|---|
| |