| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0985 |
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| Symbol | |
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| ID | 4016755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1124276 |
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| End bp | 1124908 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637954975 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_561996 |
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| Protein GI | 91792345 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0110755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGATG TTAAAGAACT GAAACAGGTT CTAACAGGAC CTATCATCAA TAACAACCCA
ATTGCATTGC AAATTTTGGG TGTGTGTAGT GCGCTTGCTG TAACCAGTAA AATGGAAACA
GCCTTGGTAA TGTCATTGGC ATTAACTGTG GTAACGGCGT TTTCTAACCT GTTTATCTCA
CTTATTCGCA ATCACATTCC AAGCAGTGTG CGTATTATCG TGCAGATGAC GATCATTGCG
TCTTTGGTTA TTGTTGTTGA TCAAGTCCTT CAAGCGTATG CCTATGAAAT TGCTAAGCAA
TTATCGGTAT TCGTTGGCCT TATCATCACT AACTGTATCG TAATGGGTCG TGCTGAAGCG
TATGCGATGA AAACACCGCC TATGATGAGC TTTATGGATG GTATAGGTAA TGGTTTAGGC
TATGGCGCTA TTTTGTTAGG CGTTGGCTTC TTCCGTGAAC TATTCGGTAA CGGTTCATTA
TTCGGTATCG AAATCCTCAG CAAAATTTCT GACGGTGGTT GGTACCAGCC CAATGGTCTG
TTACTACTTC CTCCAAGCGC GTTCTTCTTG ATCGGTGGTT TGATCTGGGT GATCCGTACC
TATAAGCCAG AGCAAGTAGA AGCAAAAGGA TAA
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| Protein sequence | MADVKELKQV LTGPIINNNP IALQILGVCS ALAVTSKMET ALVMSLALTV VTAFSNLFIS
LIRNHIPSSV RIIVQMTIIA SLVIVVDQVL QAYAYEIAKQ LSVFVGLIIT NCIVMGRAEA
YAMKTPPMMS FMDGIGNGLG YGAILLGVGF FRELFGNGSL FGIEILSKIS DGGWYQPNGL
LLLPPSAFFL IGGLIWVIRT YKPEQVEAKG
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