| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0981 |
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| Symbol | |
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| ID | 4016751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1120219 |
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| End bp | 1120728 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637954971 |
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| Product | S-ribosylhomocysteinase |
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| Protein accession | YP_561992 |
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| Protein GI | 91792341 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1854] LuxS protein involved in autoinducer AI2 synthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0614202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTAT TGGACAGTTT TACCGTAGAT CATACCCGTA TGCAGGCGCC AGCCGTGCGT
GTTGCCAAAC AGATGAACAC CCCTAAGGGT GATGCGATTA CCGTGTTTGA TTTACGTTTT
TGTGTGCCTA ATAAAGCCAT ACTGTCGGAG CGGGGCATAC ATACCTTAGA GCATTTATTT
GCCGGCTTTA TGCGAAATCA CCTCAATAGT GAGTCAGTTG AAGTCATAGA TATCTCACCT
ATGGGATGTC GCACGGGTTT TTACATGAGT CTTATCGGCA CGCCCAAAGA GCAAGAGGTG
GCCAATGCTT GGTTGCATGC CATGGAAGAT GTGTTGCAAG TCACTAAACA GGAAGATATT
CCAGAACTTA ATGAGTTTCA ATGTGGCACC TTTGAAATGC ATTCTTTACC TCAAGCGAAA
GCCATAGCTC AAGACATCAT TTCAGCGGGA ATTGGGGTGA ATCAGAACGC CGAGTTAACC
TTAGATGAAT CATTATTATC CAAAGGATAA
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| Protein sequence | MPLLDSFTVD HTRMQAPAVR VAKQMNTPKG DAITVFDLRF CVPNKAILSE RGIHTLEHLF
AGFMRNHLNS ESVEVIDISP MGCRTGFYMS LIGTPKEQEV ANAWLHAMED VLQVTKQEDI
PELNEFQCGT FEMHSLPQAK AIAQDIISAG IGVNQNAELT LDESLLSKG
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