| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0970 |
|---|
| Symbol | |
|---|
| ID | 4016740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 1111684 |
|---|
| End bp | 1112091 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637954960 |
|---|
| Product | curli production assembly/transport component CsgF, putative |
|---|
| Protein accession | YP_561981 |
|---|
| Protein GI | 91792330 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA GGATGTTATT AGCGGGCGGC TTAATTAGCT TTGCCGCTTT GACTCAGGCT
ACTGAGTTAG TCTATACCCC AGTTAATCCA AGTTTTGGCG GTTCAGCATT AAATGGCTCA
TTTTTACTTA ATAAAGCCCA AGCGCAAAAC GACAATGCCA GAACCAATGA CAAAGATTTT
GTCACTCGTT TTCAGGAGTC CTTAGAGCGT AATATCATCA ATTCCATTAC TCGCGGAGTT
GCCAATGGCG AAATTACCGA TGGCGTTTAC GATACCGGTG ACTTTAGGGT TGAAGTGTCA
CCGACGGCTA ATGGGGTAAT GCTGACCATC ACTAACTTAG AAACCGGTGA TGTGACTGTC
ATCGAAATGC CGACTTTTCC TACGGCCCCA ACTACGGGGG CTAATTAA
|
|---|
| Protein sequence | MKNRMLLAGG LISFAALTQA TELVYTPVNP SFGGSALNGS FLLNKAQAQN DNARTNDKDF
VTRFQESLER NIINSITRGV ANGEITDGVY DTGDFRVEVS PTANGVMLTI TNLETGDVTV
IEMPTFPTAP TTGAN
|
|---|
| |