| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0958 |
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| Symbol | |
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| ID | 4016560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1097108 |
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| End bp | 1097929 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954948 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_561969 |
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| Protein GI | 91792318 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.297399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTTG TTTCACTGCC AGGTCAAGTG GCTAAAGGTA AAGTCTGGTT AGTGGGCGCA
GGCCCAGGCG ATGTTGAATT GCTGACCATG AAGGCGTATC GGGTGCTAAA AAGTGCCGAT
GCTGTGCTTT ATGATGCCCT AGTAAGCCAA GATATCTTAG ATTTAATCCC CTCAAGTGCC
GAAAAAATTG CCGTAGGTAA GCGTGCGGGT AAGCACAGTG CGCCCCAAGA TGATATTAAT
CAGTTATTGG TGACTAAGGC ATATACCCGT AAAAACGTGG TGCGTCTAAA AGGCGGCGAC
CCCTTTATAT TTGGTCGTGG CGGTGAAGAA TTGCAAACCT TAGTGGCCAG TGGCATCGCC
TTTGAAGTGG TGCCTGGCAT TACAGCGGCA AGTGGCACCT CAGCCTATGC TGGCATTCCA
CTCACTCACA GAGATTATGC CCAAGGGGTG AGCTTTATTA CTGGCCATTG TCAGTTAGCC
AGCCGCCCTA TGGACTGGCA AGGCTACGCC AATCCCAATA ACACCTTAGT GGTGTATATG
GGGATTTTGA ACGCCAATAT TATTCGCGAT GGCTTAATTA ACGCAGGCCG CAGCCCAGAC
ACACCGGTAG CGATAGTGTC AAAAGCCACC ACTGCATCCC AGCAGCGATT TATCGGTAAC
TTAAACGACT TAGCCCAATT GGCGGCAGAT CCTGCCTTAG AGATGCCAGC CTTGATGATC
ATAGGCGAAG TGGTGCAACT TGCCGATACG CTCAATTGGT TTGAACCTGC GGCATTAAGT
CAGCAACAAA CACACACAAA TGTAAAAACG AGCAGTAATT AA
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| Protein sequence | MEVVSLPGQV AKGKVWLVGA GPGDVELLTM KAYRVLKSAD AVLYDALVSQ DILDLIPSSA
EKIAVGKRAG KHSAPQDDIN QLLVTKAYTR KNVVRLKGGD PFIFGRGGEE LQTLVASGIA
FEVVPGITAA SGTSAYAGIP LTHRDYAQGV SFITGHCQLA SRPMDWQGYA NPNNTLVVYM
GILNANIIRD GLINAGRSPD TPVAIVSKAT TASQQRFIGN LNDLAQLAAD PALEMPALMI
IGEVVQLADT LNWFEPAALS QQQTHTNVKT SSN
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