Gene Sden_0932 details

Gene Information

• Locus tag: Sden_0932
• ID: 4016877
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1063845
• End bp: 1065644
• Gene Length: 1800 bp
• Protein Length: 599 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637954922
• Product: sulfite reductase (NADPH) flavoprotein, alpha chain
• Protein accession: YP_561943
• Protein GI: 91792292
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0369] Sulfite reductase, alpha subunit (flavoprotein)
• TIGRFAM ID: [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.520918
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGTTAA ACGAACTTTC ATCACTGGCT TCACCTTTGT CTCAAGGACA AGTGGACCAG 
CTTAAAAAAC TCACCGCAGA GCTTTCTGCC GTACAACTTG CTTGGGTGAG TGGTTATCTA 
GCGGCCAGTG CAAACTCGGG AGCCAACGTA GGCCAAGGCG CAGGGGCATT AGCTCAAGCT 
GCCCCTGAGC AAACCGTGAC CATACTCTAC GGTAGCCAAA CCGGAAACGG GCGCGGCGTC 
GCCACAGCGT TAGCCGCTAA AGCCCAGGCT CAAGGCTATG CGGTTAATCT CACTTCTATG 
GGGGATTACA ACAGTCGCCA GTTAAAGCAA GAAACCTTGC TATTACTTGT GGTCAGCACC 
CATGGTGAAG GCGAAGCGCC AGATGATGCC ATGGAGCTGC ACAAGTTCTT AGGCTCTAAG 
CGTGCCCCTA AATTAGATCA ACTGCATTAC TCAGTGTTGG CATTGGGCGA CTCAAGCTAT 
GAGTTTTTCT GCCAAACCGG CAAAGATTTT GATGCCCGCT TAAGCGCACT TGGCGCCAAG 
TCACTCCTGC CTATGGTTGA ATGTGACGTG GATTACGATA AAGCCGCGGA TACATGGCAA 
GAGCAAGTCA TCACTGCCAT CAAGCCGCAC CTTGCTAGCA CAAGTGTTAG CAGCGCCAGT 
GTGGTGTCTA TCAATAGCGC TCAAGAGAGC ATCTTTAGCA AGCAAGCCCC ATACAGCGCC 
GAAGTGCTAG TGAGCCAGAA GCTTACCGGC CGTGATTCAG ACAGAGACGT GCGCCATGTG 
GAAATCGATT TAGCCGATTC TGGCCTCACT TATGAAGTGG GTGATGCCTT AGGCATTTGG 
TTTACTAACA ATGAAGCCTT AGTTGATGAA ATTATTTCAT CATTGGCATT AAGCGCCGAT 
GAGCCTGTGA CTATCGGCGA TAACAGCATG AGTCTCAAGC AAGCCTTAAT TGAACATAAA 
GAACTCACTC AGCTAAACCC AGCCTTCGTA AAAGCCTGGG CCGAGCTAAG CGTGAATGCC 
AAGTTACTTA GCCTACAGGA TGATAAAGCC GCCCTGCGCC AATTTATCTT AAGTCATCAG 
GTGATTGATT TAGTCACGGC TTATCCTGCC AAGGTGGACG CGGCCCAGTT TGTTGAGTTA 
CTGCGCCCAT TAACCCCGCG TCTTTACTCT ATTGCTTCAA GCCAAGCTGA AGTAGAAGCA 
GAGGTGCACT TAACTGTGGC GCTGGTTGAA GATGAGCGTC AAGGTCAAAC CCGTTTTGGC 
GGCGCCTCGC ACTTCTTAGC TTCAGCGCAG GAAGGTCAAA GCGTTAAGGT TTATGTGGAG 
CCGAACAAGC ATTTTCGCCT ACCAGAAAAC CCTGACACCC CAGTTATCAT GGTGGGACCT 
GGCACTGGCG TGGCACCATT TCGCGCCTTT ATGCAGCAGC GCGCAGTGGA TGGTGTTAGT 
GGCAACAGCT GGTTATTCTT TGGCAACCCG CACTTTGAGC AAGATTTCTT GTACCAAACT 
GAGTGGCAGC AACACCTTAA AAATGGCGAG TTAACTCGTC TTGATGTGGC CTTCTCACGG 
GATCAAGCCC ACAAGGTCTA TGTGCAGCAC CGCATTAAAG AGCAGGGCCG TGACGTATGG 
CAGTGGCTAC AAGATGGCGC TCATTTGTAC ATCTGTGGTG ATGCAGAGCG CATGGCCAAA 
GACGTGCATC AGGCATTAAT TGAAGTGGCA ATGGAATTTG GTGGCCTGAG CGCGGATGAC 
GCGGCGGCTT ACCTTGATGA GCTTCGCAGC CAGAAGCGCT ACCAAAAAGA CGTCTATTAA 

 

Protein sequence

MLLNELSSLA SPLSQGQVDQ LKKLTAELSA VQLAWVSGYL AASANSGANV GQGAGALAQA 
APEQTVTILY GSQTGNGRGV ATALAAKAQA QGYAVNLTSM GDYNSRQLKQ ETLLLLVVST 
HGEGEAPDDA MELHKFLGSK RAPKLDQLHY SVLALGDSSY EFFCQTGKDF DARLSALGAK 
SLLPMVECDV DYDKAADTWQ EQVITAIKPH LASTSVSSAS VVSINSAQES IFSKQAPYSA 
EVLVSQKLTG RDSDRDVRHV EIDLADSGLT YEVGDALGIW FTNNEALVDE IISSLALSAD 
EPVTIGDNSM SLKQALIEHK ELTQLNPAFV KAWAELSVNA KLLSLQDDKA ALRQFILSHQ 
VIDLVTAYPA KVDAAQFVEL LRPLTPRLYS IASSQAEVEA EVHLTVALVE DERQGQTRFG 
GASHFLASAQ EGQSVKVYVE PNKHFRLPEN PDTPVIMVGP GTGVAPFRAF MQQRAVDGVS 
GNSWLFFGNP HFEQDFLYQT EWQQHLKNGE LTRLDVAFSR DQAHKVYVQH RIKEQGRDVW 
QWLQDGAHLY ICGDAERMAK DVHQALIEVA MEFGGLSADD AAAYLDELRS QKRYQKDVY