| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0931 |
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| Symbol | pntA |
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| ID | 4016876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1061945 |
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| End bp | 1063501 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637954921 |
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| Product | NAD(P) transhydrogenase subunit alpha |
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| Protein accession | YP_561942 |
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| Protein GI | 91792291 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
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| TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.867027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATAG GAATACCCAA AGAGAGCCTA AGTGGTGAAA CTCGGGTCGC AGCCACACCA
GCGACCATAA AACAGCTCAG TAAACTGGGA TTTGACCTAG TCGTTCAGGC AGGTGCAGGA
CAGTTATCTA GCTTTGATGA TGCCGCCTAC CGTGAAGCTG GCGCGCACAT TGATGACAGT
GACAGTGGCA AAGCTAAAGA GGGCAACACT GTCTGGCACA GCGATATTAT TTTTAAGGTT
AATGCCCCAA GCGAAGATGA AATCGCGCTA CTTCAAGCCG GCACCACCTT AGTCAGCTTT
ATCTGGCCAG CGCAAAACCC AGAGCTAGTC GCCAAACTTG CAGAAAAACA AGTGACTGTG
ATGGCCATGG ACATGGTGCC GCGCATTTCA CGGGCACAAT CTTTAGATGC CTTGTCTTCC
ATGGCAAACA TTGGCGGGTA TCGCGCCGTC GTCGAAGCCG CCCACGAATT TGGCCGCTTC
TTCACCGGAC AAATCACCGC CGCAGGCAAG GTGCCACCTG CTAAAGTGTT AGTGATTGGC
GCAGGTGTCG CCGGCCTTGC CGCTATTGGC GCAGCGGGCT CTTTAGGGGC CATAGTGCGC
GCCTTTGATA CCCGTCTTGA AGTAGCCGAA CAAATCGAGT CCATGGGCGG TGAGTTTTTA
AAACTTGAAT TTGAAAACAG CGAAGGCGGC TCGGCAGACG GTTACGCTAA AGTCATGAGT
GATGAGTTTA TTGCCGCCGA AATGGCGCTA TTTGCAGAGC AAGCCAAAGA AGTGGATATC
ATCATCACCA CTGCGCTTAT TCCAGGGCGC CCAGCACCAA AACTCATTAC CCAGGCCATG
GTCGATTCCA TGAAAAGTGG CTCTGTGGTG GTGGATTTAG CCGCCGCCAC AGGGGGCAAC
TGTGAGTACA CAGTCACAGG CGAGAAAATT ATCACCGCAA ACGGGGTGAA AATCTTAGGT
TATACCGACC TTCCCGGCCG GTTAGCGGCC CAATCTTCCC AGCTTTATGG CACTAACTTA
GTCAATCTGA TGAAGCTGAT GTGTAAAGCC AAAGACGGCG CCGCCTTACT GGACTTAGAT
GATGTGGTGA TGCGCAATAT GACGGTCGCA AATTTGGGTG AAGTCACCTT CCCGCCGCCC
GCCATTTCTG TTTCCGCGGC GCCGCCAAAG CCTGCTGCCA GTGTTGATAC TAAACCTCAG
CTTGACGCTA AACCATCAAA ACTCAAGTGG GTTTTAGCCG CCTTAGGGGT TGCAGGTTTT
GCCGCTGTGG CGTCTGTGGC CCCCCCTGAG TTTTTATCTC ACTTCACTGT GTTTGTGCTC
TCTTGCGTGG TGGGTTATTA CGTGGTGTGG AACGTCTCCC ACTCATTGCA CACGCCCTTG
ATGTCGGTCA CCAATGCCAT TTCAGGCATT ATCGTGGTGG GCGCACTCTT GCAGATAGGC
CAAGGCTCCA CACTCGTCAC TGTACTGGCC TTTATTGCCG TACTTATCGC CAGCATCAAC
ATTTTTGGCG GCTTCACCGT CACTCAGCGC ATGCTGAAGA TGTTCCGTAA AGATTAA
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| Protein sequence | MQIGIPKESL SGETRVAATP ATIKQLSKLG FDLVVQAGAG QLSSFDDAAY REAGAHIDDS
DSGKAKEGNT VWHSDIIFKV NAPSEDEIAL LQAGTTLVSF IWPAQNPELV AKLAEKQVTV
MAMDMVPRIS RAQSLDALSS MANIGGYRAV VEAAHEFGRF FTGQITAAGK VPPAKVLVIG
AGVAGLAAIG AAGSLGAIVR AFDTRLEVAE QIESMGGEFL KLEFENSEGG SADGYAKVMS
DEFIAAEMAL FAEQAKEVDI IITTALIPGR PAPKLITQAM VDSMKSGSVV VDLAAATGGN
CEYTVTGEKI ITANGVKILG YTDLPGRLAA QSSQLYGTNL VNLMKLMCKA KDGAALLDLD
DVVMRNMTVA NLGEVTFPPP AISVSAAPPK PAASVDTKPQ LDAKPSKLKW VLAALGVAGF
AAVASVAPPE FLSHFTVFVL SCVVGYYVVW NVSHSLHTPL MSVTNAISGI IVVGALLQIG
QGSTLVTVLA FIAVLIASIN IFGGFTVTQR MLKMFRKD
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