Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0930 |
Symbol | pntB |
ID | 4016836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1060449 |
End bp | 1061933 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637954920 |
Product | pyridine nucleotide transhydrogenase |
Protein accession | YP_561941 |
Protein GI | 91792290 |
COG category | [C] Energy production and conversion |
COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.339922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTCAAG GATTAGTAAG CGCATCGTAC ATCATCGCCG CCGTGTTTTT TATTTTAAGC CTGGCGGGCT TATCGAAACA AGAAACCGCC AAACGAGGTA ATTGGTTTGG CATTATAGGT ATGGCGGTTG CTCTTGGCGC CACCATTTTA AACCCAAGCA CCACAGGGGT GGCTTGGATT ATTCTAGCTA TGGTCATAGG CGCTGCCATA GGTATTCGCT TAGCCCTAAA AGTTGAAATG ACCCAGATGC CAGAGCTTGT GGCCATTTTA CACAGCTTCG TCGGCCTTGC CGCCGTGCTG GTGGGCTTTA ACAGCTTTAT CGACCTTCAT CCACAGGCTG TGAATGAAAT CGTACTGGTA TTGGGGGAGG ATTTATCCAC GACTTTAGAG AGCGCCAAAG CAGCCTTTAT GGAAGTCAGT ACTCAAGATA AAGGGCTGCA CTTAGAAGGT GCCATGCTCA ATATCCATTT GGTGGAAGTG TTTTTAGGCA TCTTCATTGG CGCTGTGACC TTTACTGGCT CCATCGTCGC CTTTGGCAAG CTTAATGGCA GGTTGTCCTC TAAAGCCTTG GCGTTGCCCC ACAGACATAA GCTTAACTTG CTGGCGGTAC TGGTCTCTAT TGGCTTAATG CTCATGTTTG TACAAGCAGG CGGTGCATTA ATTCCGCTTA TCATAATGAC CTTAATTGCA CTCGCCTTTG GCTGGCATTT AGTGGCCAGC ATAGGCGGCG CAGACATGCC AGTAGTGGTG TCGATGCTCA ACTCCTATTC GGGTTGGGCG GCAGCGGCGG CAGGTTTTAT GCTATCAAAC GACTTGCTGA TTGTTGTGGG TGCACTCGTA GGCTCATCCG GCGCGATTTT ATCTTACATC ATGTGTAAGG CGATGAACCG CTCGTTTATT TCAGTGATAG CTGGCGGCTT TGGCAGTGAT GGCGTTGCCA GTACGGCAAG CGATGAAATG GGCGAATACC GCGAAACTAA CGCCGAAGAT GTGGCTGATT TGCTCAAACA CGCAGATTCT GTGGTTATTA CCCCAGGCTA TGGCATGGCG GTCGCACAGG CTCAGTATCC GGTGGCTGAA ATTACCCGCA AGCTTCGCGC CATGGGTATC AAGGTGCGCT TTGGCATCCA CCCTGTTGCT GGGCGTCTGC CTGGCCACAT GAACGTGCTG TTGGCTGAGG CCAAAGTGCC CTATGACATA GTGCTGGAGA TGGATGAAAT CAACGAAGAT TTCAGTGACA CAGACGTGGT GCTTGTTATC GGCGCTAACG ACACTGTGAA TCCTGCCGCC ATGGAAGACC CTGGGAGTCC GATTGCTGGC ATGCCAGTAT TAGAAGTCTG GAAAGCCCAA ACCGTGATCG GCTTTAAGCG CTCCATGAAC ACAGGTTATG CCGGCGTGCA AAACCCTTTG TTCTTTAAAG ACAACACCCA AATGCTATTT GGCGATGCTA AAGAGTCAGT TAATCAAATC TTGGCACATC TTTAA
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Protein sequence | MSQGLVSASY IIAAVFFILS LAGLSKQETA KRGNWFGIIG MAVALGATIL NPSTTGVAWI ILAMVIGAAI GIRLALKVEM TQMPELVAIL HSFVGLAAVL VGFNSFIDLH PQAVNEIVLV LGEDLSTTLE SAKAAFMEVS TQDKGLHLEG AMLNIHLVEV FLGIFIGAVT FTGSIVAFGK LNGRLSSKAL ALPHRHKLNL LAVLVSIGLM LMFVQAGGAL IPLIIMTLIA LAFGWHLVAS IGGADMPVVV SMLNSYSGWA AAAAGFMLSN DLLIVVGALV GSSGAILSYI MCKAMNRSFI SVIAGGFGSD GVASTASDEM GEYRETNAED VADLLKHADS VVITPGYGMA VAQAQYPVAE ITRKLRAMGI KVRFGIHPVA GRLPGHMNVL LAEAKVPYDI VLEMDEINED FSDTDVVLVI GANDTVNPAA MEDPGSPIAG MPVLEVWKAQ TVIGFKRSMN TGYAGVQNPL FFKDNTQMLF GDAKESVNQI LAHL
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