Gene Sden_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0893 
Symbol 
ID4016702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1020023 
End bp1020907 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content45% 
IMG OID637954883 
Producthypothetical protein 
Protein accessionYP_561904 
Protein GI91792253 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAATA AAGCCATAGA ACAGGATATT CAAAATTATC TGCATCAACT CGTCGCAGAA 
CTTGCGGGGC AGGATGCTGC GCTCATTCAA GATGCAAAAT ATGATGCAGA AAGCCACTTT
CGTGCTGCTG TGGAAGAGGC TGATACCCAG ACTAATCCTA TGCCTGAAAT AATTGAGCAT
TACGGTAGCC CTGTGGAGGT AGCCCAGTAT TATCGCGAAA TGGAGTTAAC CGTTAATTGG
GCGCTACACG GCCACAAAAA GCCCAAAAGC CTTAATAAAT CGCATCCTGT GTTCTCAATA
TTAATCGATA TGTCAGCCTA TAAAGCGCTA GTTTATTTCC TCCTAAGCCT GCCACTCGCT
ATCGCTTATA TGGCATGGAC CGTAATGCTT GGCTTCAGTA GCGCCGCAGC ATCCATAGTC
TTGATTGGGA TCCCAGTATT TATATTATTT ATCAACTCAA TGCATTTTTT TTCTTTGTTC
GAAGGCCGAT TAATCGAAAC CTTTCTAGGT GAGCGCATGC CCCGCAGGCC CATCTATCCG
CAGAAACAAC CGACATTACT GTCCTTGGAC GCCATTAAGG CCCTTTTTCA AAACCGCCGT
AATTGGACAT CGAGCTTGTA TCTGATGCTG CAACTGCCGC TGGCAATTGT CTATCTTGTG
GTTATTGTTG TGCCCGCCTT GCTTGCAGCG GTTTTGTTTT TGTCACCTAT TGTCGACCCC
ATAATGCACG CCATAAATCC TTCCCTAGAC ATAGATATTA ATTGGTATTG GTACCCTATT
ACCGCCCCCT TAAGCGCGCT TTGCTTACTG CTGTCATTGC ATTGTGCAAA ATTTATTGGC
AAACAACAGG CAAGATACGC TAAGTCAATG CTGGTCTCGA CTTAG
 
Protein sequence
MLNKAIEQDI QNYLHQLVAE LAGQDAALIQ DAKYDAESHF RAAVEEADTQ TNPMPEIIEH 
YGSPVEVAQY YREMELTVNW ALHGHKKPKS LNKSHPVFSI LIDMSAYKAL VYFLLSLPLA
IAYMAWTVML GFSSAAASIV LIGIPVFILF INSMHFFSLF EGRLIETFLG ERMPRRPIYP
QKQPTLLSLD AIKALFQNRR NWTSSLYLML QLPLAIVYLV VIVVPALLAA VLFLSPIVDP
IMHAINPSLD IDINWYWYPI TAPLSALCLL LSLHCAKFIG KQQARYAKSM LVST