| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0891 |
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| Symbol | |
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| ID | 4016992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1017380 |
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| End bp | 1018801 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954881 |
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| Product | DEAD/DEAH box helicase-like protein |
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| Protein accession | YP_561902 |
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| Protein GI | 91792251 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTTT CAACACTTGG ATTGAGCCAA CCCATTTTAT TAGCCTTGGA GGAGTTAGGT
TATCAAACAC CGACCCCCAT TCAGGAAAAG GCCATCCCGG TAATTTTAGA AGGTCACAAC
CTGATTGCGG CGGCGCAAAC CGGCACAGGT AAAACGGCAA GTTTTGTACT GCCGCTGCTT
GAGCTGATTA ATAACACCAG TCTTGATAAC ACAGTGAAAG TGCGCCCTAA GCGTATTCGT
GCACTGATTT TAACCCCCAC TCGTGAACTT GCTGTGCAGG TTGCTGAGAA TATTGAACAA
TACAGTAAGC ATCTTTCCCT GACCTCCCTT GCCATCTATG GGGGTGTCGA TGCTGCGCCC
CATAAGAAGC GCTTGATAGA AGGGGTGGAT ATTCTGGTGG CAACCCCTGG GCGTTTGCTG
GACATGTACA CCCAAAGGGC GGTGCATTTC GATGAGCTGA CTCACCTTGT ATTAGATGAA
GCCGACAGAA TGTTAGACAT GGGCTTTATC GAAGACATTA ATAAAATCAT CGATAAGTTG
CCTCAAGAGA GACAAAACCT GTTGTTTTCG GCGACTTTGT CGCCTCAGGT GCGCTTCCTT
GCTAAAACCG CAGTTCAGCA TGCGAAAGAA ATCGCTATTT CAGCCAAGGT AGGTAAGCCC
AAGATTGAGC AGTGGCTCAC GGCGGTAGAT AAAGAGAAGA AGTCGGCGCT AATAAGCCAA
CTGATTAAAG AAAATGATTG GCCACAGGCG CTGATATTTA TCGAAACCAA GCATGGCGCC
GCCAAGCTTG TGAGCCAACT TGAGAAGCGT GATATTCAAG CCGAGGCTAT TCACAGTGGC
CGCAGCCAAG CTTCACGTGA GCAAGTATTA GCCGACTTTA AAAGCGGCAA AGTGCGATAT
CTTGTGGCCA CAGGTATCGC CTCTCGCGGT TTAGATATTG ATGATTTAGC TAGGGTGGTT
AATTACGATT TGCCGTTTCC GCCAGAAGAT TATGTTCACC GTATTGGCCG AACCGGCCGC
GCTGGTGCAC AGGGCGAGGC CATCAGTTTT GTGTCAAATG ATGACTTTAA AAACCTGTGC
GCTATAGAGC GTTTATTAGG CCATGAAATA GAGCGTAGAG TCATTGCAGG TTTTGAGCCG
AAAAGGCCCT TGCCAGCATC AAACTTAAGC TTCGTGCCAG CCCACAAGCG TGACGGTCAT
CAGCCACGCA CTAGCGAGCG CCACACCACT AAAGCGCGCA CCCCAGTCAA GCCTAAAGCC
CCAAGAGAGG GTGTGCCATT TGAGCCTCGT CAAGGCAGAA GCGCAGAGCA AACCCAGGGC
AGAACTCAAA AAAGCCGGGA TCCAAGTTCG AATACCGGCA ACAGTAACCC CATTAATCAA
GCGATATGGG GCAACAGAGA CAGCAAAACA GATAAAAAAT AG
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| Protein sequence | MPFSTLGLSQ PILLALEELG YQTPTPIQEK AIPVILEGHN LIAAAQTGTG KTASFVLPLL
ELINNTSLDN TVKVRPKRIR ALILTPTREL AVQVAENIEQ YSKHLSLTSL AIYGGVDAAP
HKKRLIEGVD ILVATPGRLL DMYTQRAVHF DELTHLVLDE ADRMLDMGFI EDINKIIDKL
PQERQNLLFS ATLSPQVRFL AKTAVQHAKE IAISAKVGKP KIEQWLTAVD KEKKSALISQ
LIKENDWPQA LIFIETKHGA AKLVSQLEKR DIQAEAIHSG RSQASREQVL ADFKSGKVRY
LVATGIASRG LDIDDLARVV NYDLPFPPED YVHRIGRTGR AGAQGEAISF VSNDDFKNLC
AIERLLGHEI ERRVIAGFEP KRPLPASNLS FVPAHKRDGH QPRTSERHTT KARTPVKPKA
PREGVPFEPR QGRSAEQTQG RTQKSRDPSS NTGNSNPINQ AIWGNRDSKT DKK
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