| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0876 |
|---|
| Symbol | |
|---|
| ID | 4016977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 1001228 |
|---|
| End bp | 1001737 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637954866 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_561887 |
|---|
| Protein GI | 91792236 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACCC CTGAACACGC CAATGCCCCC AGAGCCAGTT TTATGCGCCG TTTAGGCGCC
GCGGTATACG ACTTATTGCT GGCAGTCGCA GTGTATATGT TCTCTGGCGC CCTAGGCTTT
GGTGTTTTTT TCCTGTTAAC CTCATCTGGA ATGATTGCCA TGGCGGGCCA TGAGCATATT
TCCGATTTGT TGAACGCCAC CCCCCTGTAT CACGGCCTAT ATCAATTGTG GCTCGTCTTG
TGTGTGGGTA GTTTTTACGC CCTGTTTTGG AGCCGAGGAG GACAAACCTT AGGCATGCGC
GCCTGGAGAC TTAAAGTGCA ACACCCCAAC GGGCAAAACT TAAGTTTCAT TACCGCTTGC
GCCCGAGTGA TATGGTCATT ATTAGGATTG GGTAATCTGT GGATTTTAAT TAATCCCGAT
AAACTGGCCT TGCAAGACAG TTTAACTCGC TCAGAAGTGG TGTTATTGAG CATAGAAGAA
AACCAGATGC GCAACTGGCA CGGTGCTTAA
|
|---|
| Protein sequence | MRTPEHANAP RASFMRRLGA AVYDLLLAVA VYMFSGALGF GVFFLLTSSG MIAMAGHEHI
SDLLNATPLY HGLYQLWLVL CVGSFYALFW SRGGQTLGMR AWRLKVQHPN GQNLSFITAC
ARVIWSLLGL GNLWILINPD KLALQDSLTR SEVVLLSIEE NQMRNWHGA
|
|---|
| |