| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0859 |
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| Symbol | |
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| ID | 4017054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 981923 |
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| End bp | 983719 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954849 |
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| Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
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| Protein accession | YP_561870 |
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| Protein GI | 91792219 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0384852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAT TACTGCCTTA TTTGCGCCTA TTTAAGCAAC ACTTCTTAAT CATGGGTCTG
GGTTTTTTAT TGACTCTTGT GAGCCTTTTA GCCGCCATGG GGTTATTGTC TTTATCAGGC
TGGTTTATTT CGGCGGCGGC CCTCGCCGGC CTTACCGCAG CCAGTGCCGC GGCGTTTAAT
TTTTTTACTC CAGCTGCAGG GGTCAGGTTC TTCTCTATTT TACGTACCGT CAGTCGTTAT
GGCGAACGCA TGACCACACA TAATGCCACG TTTAGCTTAC TTGCAGACCT TAGAGTCTGG
GTGTGGAAAC AGATACTACC CTTGAGTCGC CAACAACTTA AGGGCATACG CCAAGGTGAC
TTACTCAACC GCTTAATTGC CGATATCGAT ACCTTAGATC ACCTTTATTT ACGCTTAATC
ACCCCTATGG CGGCCGCATT AGTGATGATC TTAAGCCTGT ACTTTTTTGT GGCTTGGTTT
CATTTAGGCA TAGCCTTAGT CTTGAGCGGA TTTTTACTTG CTAGTTGGTT TATCTTACCT
TGGATTTTTT ATCAAATAGG CATAAAAGCC GGCACAGCAT TACCCCAAGC TAAACAAACG
CTTCGAGTGC AATTAATTGA TTTGCTTCAG GGCCAAGCAG AGTTGAGTCT TTTTGACGCC
AATAGGGATT ATTTACAGCG TTTTTACCAA GGCGAATCTC GCTTGTACGC CAATCAATAT
ACCCTTGCCA AGGTTGCTGG GTTGAGCCAA GCCATGATCA TTCTTTGTCA CGGTGTCGCT
GTGCTTGGGG TGTTAATCTT GGCAGGTTTT GCCATGGAAA ATGCTGTACG CACTCAGCCC
CTAGCTTTGT CGCAACTCAT GAATCATGAG CCAATCACGG GGGCCGTGTT GGCTTTATTA
GTTTTTACCG CCATGGCTAG CATAGAAACC TTGCAGCCCA TTAGCCTTGC TTTCAATCAA
TTGGCGTCGA GTATCGCCTC GGCAAAACGA TTAAATAGCT TAGTCAACCA GACCCCCGAC
ATTATTTTTA CAAAGCAAGA ACTCGCGCCA CTTAGCAATA CTGCAGAGAT AACCTCTCCA
AGCTTAAGCT TAAGCGGTGT TTGTTTTGGC TATCCCCAAG GACTGCACCT GTTCGAGCAA
CTTGAGCTTG TAATACCTAA GGGACAAAAA GTGGCGCTAT TGGGGCCAAC GGGCTGCGGT
AAATCCAGTT TGTTAGCACT CATTAGCCGT GAATATCAAG CAAACTCTGG GGAGATACGC
CTCAATGGGC AGAATATTAA CTCACTCTCT CAATGCCAAT TGAGAAGTGC GATGAGCATA
GTCAGCCAGA GAGTCGATAT CTTTAGTGCT AGCCTGAAGG ACAATTTGGC CCTCGCCATT
AACGCTCACA CTAACGACTC AAAAGAAATC GAATCTCGAA TTCATCAAGT CTTGCAGCAA
GTTGGGCTTG AGTATTTAGC TCAGACAGAA AAAGGCTTAT CCCTTTGGCT GGGTGAAGGG
GGCCGTACAC TTTCAGGGGG GGAGCGTCGG CGCATAGGCA TAGCAAGAGT GCTGCTACAC
GATGCTGAAC TGCTATTACT CGATGAGCCG ACGGAAGGTT TGGACAATAA AACAGAAAGG
GAGATGTTAG CTTTACTGTT CGAATTTGCC AAAGACAAGA GCCTACTATT AATCAGTCAC
AAGCTCACCG CAATGGAGCA AATGGATCAT ATCTACCTGA TGAATAATGG CAAAATTGCG
CCATTAGCTA AGGATACGCT ACCCGTAACG CCATTGCCCA TGGAGCACTC TCTTTGA
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| Protein sequence | MKALLPYLRL FKQHFLIMGL GFLLTLVSLL AAMGLLSLSG WFISAAALAG LTAASAAAFN
FFTPAAGVRF FSILRTVSRY GERMTTHNAT FSLLADLRVW VWKQILPLSR QQLKGIRQGD
LLNRLIADID TLDHLYLRLI TPMAAALVMI LSLYFFVAWF HLGIALVLSG FLLASWFILP
WIFYQIGIKA GTALPQAKQT LRVQLIDLLQ GQAELSLFDA NRDYLQRFYQ GESRLYANQY
TLAKVAGLSQ AMIILCHGVA VLGVLILAGF AMENAVRTQP LALSQLMNHE PITGAVLALL
VFTAMASIET LQPISLAFNQ LASSIASAKR LNSLVNQTPD IIFTKQELAP LSNTAEITSP
SLSLSGVCFG YPQGLHLFEQ LELVIPKGQK VALLGPTGCG KSSLLALISR EYQANSGEIR
LNGQNINSLS QCQLRSAMSI VSQRVDIFSA SLKDNLALAI NAHTNDSKEI ESRIHQVLQQ
VGLEYLAQTE KGLSLWLGEG GRTLSGGERR RIGIARVLLH DAELLLLDEP TEGLDNKTER
EMLALLFEFA KDKSLLLISH KLTAMEQMDH IYLMNNGKIA PLAKDTLPVT PLPMEHSL
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