Gene Sden_0770 details

Gene Information

• Locus tag: Sden_0770
• ID: 4016720
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 890367
• End bp: 890852
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637954755
• Product: putative nucleotide-binding protein
• Protein accession: YP_561783
• Protein GI: 91792132
• COG category: [S] Function unknown
• COG ID: [COG1666] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00000279998
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCATCTA TGGATATCGT TTCTGAAGTC AACGAAGAAG AATTACGTAA CGCGGTCGAG 
AACTCTCGCA GAGAGCTAAG TAGTCGTTTC GATTTCAGGG GCAAAGAAGC CGAGATAGAG 
CACAAGGAAT TCATTGTGAC ACTTAAGGCA GAAGATGATT TTCAGTGTCG TCAATTGGTG 
GATATCCTGC GTATTCAACT GAGTAAGCGC GATGTGGATC CCTCTTCCAT GGAAGTGGAT 
GATAAAGCCA TTCACAGCGG CAAGACCTTT TCTTTGAAAG TGAGCTTCAA GCAAGGCATA 
GATAGTCTAG TGGCGAAGAA GTTAGTCAAG CAAATTAAAG ACAGCAAGCT TAAAGTTCAG 
GCTGCAATCC AAGGTGATAC AGTGCGAGTT ACCGGCAAGA AACGTGATGA TTTACAAGCC 
GTGATGCGCC TTGCTAAAGA ATCTGAACTG GGTCAGCCAT TTCAGTTTAA TAACTTTAGA 
GATTGA 

 

Protein sequence

MPSMDIVSEV NEEELRNAVE NSRRELSSRF DFRGKEAEIE HKEFIVTLKA EDDFQCRQLV 
DILRIQLSKR DVDPSSMEVD DKAIHSGKTF SLKVSFKQGI DSLVAKKLVK QIKDSKLKVQ 
AAIQGDTVRV TGKKRDDLQA VMRLAKESEL GQPFQFNNFR D