Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0751 |
Symbol | |
ID | 4016590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 873795 |
End bp | 874970 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637954736 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_561764 |
Protein GI | 91792113 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAATT CTCAGTACAA TCCCACTCGC CGAACCCTAT TAAAAGGCCT TGGTGCAGCC AGTTTACTGA GTCCTTTGGC ATCACTCCCA AGCTGGGCCG CCAGTCAGCG CCTTTATGTG GATGGATTAT CCTTTCTACC GAGCGATCTC GGTGACGTAC GCGCCTCAAA GCTCGATGCC TTCATCGCCG ACATTTCGGC CATAGAAACC CTCACTCAAG CCGATGGCAC ATTAAATTAC AAACGCACCT TCGATGCTTG CATCAAGAGT ATCAAGCAGG CCGCTGACAC AGTCAAAGAT AACCCTGAAG TCTATTTGCA GGGCTTAACC GGTACCGACA TAGCCAAAGC CAAACAAGCG TCCCGTACCG CAGTGTATTT TCAAATACAA GGGGCAGACT GCGTCGAACA AGACATAGCT AATGTGAATA GTTCAGCAAA CTGGCAACAC CTCAGCACCC TGCACCAGCA AGGTCTTAGG GTACTGCAAC TGACCCATCA TTATGGCAAT CAATTTGCTG GTGGCGCACT GGATAATGAC GGTACTCAAA GCTTAGATCT GCCACTCACT CCTGCGGGTC ATCAGCTGAT TGAAGCATTA AATCATCACA ATATATTGAT AGATGTGAGT CATTCAAGCC CACAAACCGC CTTAGATACG GCCAAAGCTA GCCAATCGCC CATAGTGCAG AGCCACGGCG CGGCGCGAAA GTTTGTCAAC CATGCCCGCT GCTCACCAGA TGAAGTGATA CGTGCCATCG GCGATAGCGG CGGCGTGTTT GGTGTCTTTA TGATGAGCTT TTGGCTCACC ACCAAGGCCA ATCCCAGTAT TGATGATTAT ATTCGTCAGT TAGAGCACAT CAACCGAGTG GGCGGCGTAG ATTGCGTCGC CATCGCCAAT GACTTTTCAC TTAGAGGCCA GGAAAATTTA CTCGCGCTCA ATAATGACAA TTCCCAAGGC GTGAAAGAAT ATTTAGATTG GTGGGACAGC TTAAGAGCAA AAAATGTTCT AGGTTTTGAG GTCGAACCTC AACATGTGGT CATTCCTGAA CTTAATCATA TTGATCGCAT GAGCCGTATC GACGATGCCC TCGCCAAAGC CAGATTTAAA TCCACCGACA GAGACAGGTT CATGGGTGGT AACTGGCAAA GGGTATTAAA GACAGTACTG CTTTAA
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Protein sequence | MINSQYNPTR RTLLKGLGAA SLLSPLASLP SWAASQRLYV DGLSFLPSDL GDVRASKLDA FIADISAIET LTQADGTLNY KRTFDACIKS IKQAADTVKD NPEVYLQGLT GTDIAKAKQA SRTAVYFQIQ GADCVEQDIA NVNSSANWQH LSTLHQQGLR VLQLTHHYGN QFAGGALDND GTQSLDLPLT PAGHQLIEAL NHHNILIDVS HSSPQTALDT AKASQSPIVQ SHGAARKFVN HARCSPDEVI RAIGDSGGVF GVFMMSFWLT TKANPSIDDY IRQLEHINRV GGVDCVAIAN DFSLRGQENL LALNNDNSQG VKEYLDWWDS LRAKNVLGFE VEPQHVVIPE LNHIDRMSRI DDALAKARFK STDRDRFMGG NWQRVLKTVL L
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