| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0736 |
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| Symbol | |
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| ID | 4016842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 853327 |
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| End bp | 855015 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954721 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_561749 |
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| Protein GI | 91792098 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGATA CTAAACGCCC TCTCTATCTT CCTTTTGCAG GTCCGGCAAT CCTCGAAGCT
CCCTTGATCA ACAAAGGCAG CGCTTTTAGT GAAGAAGAGC GCATTTTCTT TAATCTTGAA
GGGTTACTTC CTTATGTTAT TGAAACCATT GAAGAGCAAG CGGCCCGTGC CTATGCCCAG
TTCAGTAATT TCAGTAACGA TCTCGATAAG CATATCTATC TAAGAAACAT TCAAGATACT
AACGAGACCT TATTCTATCG ATTGGTGCGT AACAATATCA CCGAAATGAT GCCTATCATC
TATACCCCAA CCGTGGGTCT GGCTTGTGAG CGTTTCTCTA AAAACTATCG CCGTAACCGT
GGTCTGTTTA TCTCCTATTC CAATAAAGAC AGAATCGACG ACATTCTAAA CAATTCGACT
CGCCACAAGG TAAAAGTCAT AGTTGTCACC GATGGCGAAC GTATTTTAGG TCTTGGGGAT
CAAGGCATTG GCGGCATGGG GATCCCGATT GGTAAACTGT CCCTGTATAC CAGCTGTGGC
GGCATAAGCC CTGCCTATAC CTTGCCTATT ACCTTAGACG TAGGTACAGA TAACCAAGAG
TTATTGGATG ACCCTATGTA CATGGGCTGG CGTCACCGCC GCATAGAAGG CCAAGATTAC
GCCGACTTTG TTGAAGCCTT TATGGAAGCT GTGCATCGCA GATGGCCTGA TGTGTTAATC
CAATTTGAAG ACTTTGCTCA ACGCAATGCC ATGCCATTGT TGGAGCGTTA TAAGGATCAG
TACTGCTGTT TCAATGATGA CATACAAGGC ACGGCTGCCG TGACTGTGGG TTCATTATTA
GCCGCGAGTA AAGCGGCAAA TACCCAGCTC AGTAAACAAA GAGTGGTATT CTTAGGTGCC
GGTAGCGCAG GTTGCGGCAT TGCCGAAGCA ATCGTGGCGC AGATGATCTC TGAAGGGATT
AGTGAAGCAC AAGCCCGCTC ACAAGTCTTC ATGGTTGACC GCTTAGGGCT ACTGCAAGAT
AACACAGCTA ACTTATTGCC ATTCCAACAA AAACTTGCCC AAAGTAGTGC GACGGTTAGT
CAATGGCACA TTGAAGGCGA TAGCGTGTCA CTGCTAAATG TTATCAATAA TGCTAAGCCT
ACCGTATTGA TAGGTGTCTC TGGCTCACCG GGTCAATTCA CTGAAGCCGT GATCCGCGCC
ATGCATTTAC ATTGCCCACG GCCGATAGTG TTCCCGTTAT CAAATCCTAC CAGTCGTGTG
GAAGCCACAC CTGAAGACGT GCTTAATTGG ACCAATGGCC AAGCACTGGT TGCCACTGGT
AGCCCGTTTG AGCCTGTGAC CATTGGTGAT GAAACCTTTG AGATTGCCCA GTGCAACAAC
AGTTTCATTT TCCCAGGTAT TGGCCTAGGG GTATTGGCTT GTCGTGCTAA ACGCGTGTCT
GATGAGATGT TAATGGCATC CAGTCGTGCC TTGGCCGAGT GCTCTCCCCT TGGAACAACG
AGAACAGGTT CTCTATTGCC TAAACTCGAT GATATTCAAA AAGTCAGCAA GTATATCGCC
TTTGCGGTTG CTAAAGTGGC GATGGCTCAA GGCCTGGCAC TACCACTGAC TGATGAGCTA
TTGAATAAGT CTATCGAGAA AAACTTTTGG GAACCTAAGT ATCGCCGTTA TAAGCGTACT
TCATTCTAA
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| Protein sequence | MDDTKRPLYL PFAGPAILEA PLINKGSAFS EEERIFFNLE GLLPYVIETI EEQAARAYAQ
FSNFSNDLDK HIYLRNIQDT NETLFYRLVR NNITEMMPII YTPTVGLACE RFSKNYRRNR
GLFISYSNKD RIDDILNNST RHKVKVIVVT DGERILGLGD QGIGGMGIPI GKLSLYTSCG
GISPAYTLPI TLDVGTDNQE LLDDPMYMGW RHRRIEGQDY ADFVEAFMEA VHRRWPDVLI
QFEDFAQRNA MPLLERYKDQ YCCFNDDIQG TAAVTVGSLL AASKAANTQL SKQRVVFLGA
GSAGCGIAEA IVAQMISEGI SEAQARSQVF MVDRLGLLQD NTANLLPFQQ KLAQSSATVS
QWHIEGDSVS LLNVINNAKP TVLIGVSGSP GQFTEAVIRA MHLHCPRPIV FPLSNPTSRV
EATPEDVLNW TNGQALVATG SPFEPVTIGD ETFEIAQCNN SFIFPGIGLG VLACRAKRVS
DEMLMASSRA LAECSPLGTT RTGSLLPKLD DIQKVSKYIA FAVAKVAMAQ GLALPLTDEL
LNKSIEKNFW EPKYRRYKRT SF
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