| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0638 |
|---|
| Symbol | |
|---|
| ID | 4016667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 740960 |
|---|
| End bp | 742141 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637954623 |
|---|
| Product | phosphate-selective porin O and P |
|---|
| Protein accession | YP_561651 |
|---|
| Protein GI | 91792000 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000222961 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAGA AAACATTACT TGCTACCGCA CTTTTAGGCA TGTTTGTAAG CCAAACTGCA
GCGGCGTCTG AAGAGACTCA AGAATTACGT AAAATCATTG AGCAACAACA GAAAGTATTA
AAAGATTTAG AAAAGCGTCT CGAGCAGACA GAACAACGTG TAGAAAAAAC TGCCGACGTG
GTTGAATCAA CTGCCTCTAG TAAATCAGCA ACCACTATTG GTGGTTATGG TGAGCTGCAC
TACAACAATA TCTCTGACAA TCTAAAAAAC ACCGATAAGA AAGAGTTCGA TTTCCACCGT
TTCGTATTGT TTGTTGGCCA CGAGTTCAAC AGCACAACCC GTTTCTTCTC TGAATTAGAA
GTTGAGCACT CCATTGCTGG CGAAGGTAAA AAAGGCGAAG TTGAATTAGA ACAAGCCTAT
ATCGAGCATG ACTTTAACGA CATGCTAACC GGTAAAGCGG GTCTATTCCT AATGCCAGTG
GGTATCATCA ACGAAACTCA CGAACCAACG ACGTTTTACG GTGTTGAGCG TAACCCAGTT
GAGAAAGACA TCATCCCAGC GACTTGGTGG GAAGGGGGTC TTAACTTAAA TATTAAAGCG
GCACCTGGTG TTGCCTTTGA TACTGCTGTG ACTTCAGGTT TGTATATTCC TCAGGGTAAA
GAATACAAAA TCCGTGATGG TCGCCAAAAA GTCTCTGAAG CTAAAGGCGA AGACTTAGCC
TACACCGGCC GTGTTAAGTA CACTGCGGTG CCAGGTCTTG AGCTTGCAGC GACTGTGCAA
TACCAGTCAG ACTTAACCCA AGGTGAAGCA GGTGTTGATA CAGCATCAGC GACTTTAGTG
TCAGCTCACG CTATCTATAA CATTGAAAAC TTCACTGTTA AAGCGCTTTA TGCCCAGTGG
AACATAGATG GTAAAGAAGC TGAAGCCTTA GGCCGTGATA AGCAAAACGG TTTCTACATC
GAGCCGTCTT ACCGCATCAA TGACCAGTTT GGGGTATTCG CTCGTTACAA CGAGTGGGAC
AACAACGCTG GCGACAATGC TGCTGATACC AAGAAAAAGC AAACCAACGT AGGTGTGAAC
TACTGGTTAC ATGAAAATGT GGTATTTAAA GCTGATTATG AAAACATCGG CGGCGCTGCA
GATTCTGACG GCTTTAACTT AGGTGTTGGT TACCAATTCT AA
|
|---|
| Protein sequence | MMKKTLLATA LLGMFVSQTA AASEETQELR KIIEQQQKVL KDLEKRLEQT EQRVEKTADV
VESTASSKSA TTIGGYGELH YNNISDNLKN TDKKEFDFHR FVLFVGHEFN STTRFFSELE
VEHSIAGEGK KGEVELEQAY IEHDFNDMLT GKAGLFLMPV GIINETHEPT TFYGVERNPV
EKDIIPATWW EGGLNLNIKA APGVAFDTAV TSGLYIPQGK EYKIRDGRQK VSEAKGEDLA
YTGRVKYTAV PGLELAATVQ YQSDLTQGEA GVDTASATLV SAHAIYNIEN FTVKALYAQW
NIDGKEAEAL GRDKQNGFYI EPSYRINDQF GVFARYNEWD NNAGDNAADT KKKQTNVGVN
YWLHENVVFK ADYENIGGAA DSDGFNLGVG YQF
|
|---|
| |