| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0616 |
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| Symbol | metL |
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| ID | 4017030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 702061 |
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| End bp | 704502 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954601 |
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| Product | bifunctional aspartate kinase II/homoserine dehydrogenase II |
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| Protein accession | YP_561629 |
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| Protein GI | 91791978 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGTA GTCATTTACA TAAGTTTGGT GGTTCGAGTC TTGCTGATGC TGACTGCTAT
CGCCGTGTCG CTCATATTCT GTTGACCCAT GGTCACAGCG ATGACTTGGT CGTGGTGTCT
GCTGCAGGGA AGAGCACTAA CTTCTTATAT AAATTATTGG ATCTGCGCGA TACAGGCCAG
CTATGGCAAG AAGAGTTACA GGTGCTGATA AGTTTTCAGC AGGCACTCAT AGAACAGCTG
TTATCAAACG AGCAGGCGCG GGATCTGCGC GAGCGCTTAT CTAACGATAA AGCTCAGTTG
GCGAGTTTGC TGTCCCTTGA ACAGCGTAAC GAATACCAAA TCAGCCATGT AGTTAGCTTT
GGTGAGCGTT GGTCGGCGCG CTTGATGGCA GCATTACTGC GAGAATCGGG CGTGGCCGCA
AGTCATGTGG ATGCCTGTTC CATTCTGGTG GCCGATGAAG GCGCGGTACC CAAAATTCGA
GTAGAAGAAT CGAAAGCCAA AATCCAGACC TTACTTGCTG AACGTACTAA CGAACGTCTC
GTGATCACAG GGTTTATTTG CGCCAATGCT CAGGGCGACA CCTTATTACT GGGCCGCAAT
GGTTCAGACT TTAGCGCCAC CTTGATAGCC AGCCTTGCCG ACATTGGCCG AGTGACCATT
TGGACCGACG TAGAAGGCAT ATTCAATGCC GACCCTAATA AAATTAACGA TGCCAAATTA
TTAAAAAGCA TGTCGTTGGC TGAGGCGGAT AGATTAGCTC GCCTTGGATC TCCTGCCCTG
CATTCACGCA CCTTGCAGCC GTTATTCAAT ACTCAAGTGA GTCTAGCGGT GCGTTCAAGT
TACGCTTCAC ACACAGATTT CACCTTGATT GCTCCCCAAA GCTCATCGGC CAGCGCACCT
GTGGTGACCA GCTTGTCGCA AGTGGTGCTG TTTAGTTTTA AGCTTGAGAC CCATAACAAG
ATAGAGTCAG ACTCTCAATC TAAGCCACAG CCTCAGTCGC AGTTTGAGTC TGTATTGGCG
GCGTTGACTT CGGCGGGTCT TACGCCTTTG GCCCACTGGG AATATGGCGC AGATAAGCAC
GAACTGGCCT TTATGCTGGA AAATCAAAAG CAAGTAAATG CACTGCTAAG CAAGCAGGCG
CCGACATTTG GCATTACTGA GCTGCAGCTT AATCTGGACT TAGGCCTAGT CGCCCTAGTG
AGTGCCGATG CTGAGCATTT TAGACGCAGT TTTGCCAGGT TGTTAAGCCG TGATGCTAAG
CCCATTTATC AAGACAATTT AAGCTTAGTG ACCTTAGTGC CTCGGGCACA AGTGAATCTG
TTAACCCAGA AAGTTCATCG CCGCTGCGCC GGTCCCAAGA TGCGGATCGG GGTGTTATTA
CTTGGCGTGG GTAACATAGG TGAGGCCTGG GTGGATTTAT TTCGCCGTGC CAATCATGCC
CTTAACAATG AATTAGAAGC CAGTGTCGAG CTGGTGGGCA TTGTTAGTTC GAAAAAAGCC
TTGATCGCCG AGCAAGGGAT TGATCTTAAC CATTGGCAGC AGATCTTTGC GGAAAAGGCG
TGTCAGTGGC AATACGAGCA GCTGTTTGAG CGCCTAGATA AGTTAGATTG TGATGAAATA
GTGGCATTAG ACATCAGCGC CAGCGCCAGT TTAACCTTGC AATACCCAGA GTTATTCGCT
CGAGGTATTC ATGTGGTCAG TGCTAACAAG CTTGCGGGTT CGGGACCTTT ACCCTTCTAT
AAAGAATTAA AGCAGCAACT GAGTAATCGC AGACTGTTCT GGCGCTATAA CGCCAGTTGC
GGCGCGGGTT TACCTATTCA ACATGCCCTC AATGATTTAC GCAATAGTGG TGACACCATA
GAGGCGGTTG GCGGTATTTT TTCAGGCACC CTATGCTGGT TATTTGAAAA TTTTGACGGT
AAAAAATCAT TCTCTGAATT GGTACTTGAA GCCAAGTCTT TAGGCCTGAC GGAGCCCGAT
CCTAGGGATG ATTTATCTGG CCGTGATATG CAGCGCAAGT TGCTTATTCT TGCCCGTGAA
ATCGGCCTTG GTATCGAACT TGATGATATT AAACTGCATT CTTTAGTGCC AAGCGAACTA
GTGGATTTAC CGCTGGATGA CTTTTTAGCT CAAATTCGCT CTCTAGACAG TGATATTTTG
CAGCAATATT TAAGTGCTGC CGAGCAAAAC AAGGTGCTGC GCTACGTGGC TTCATTGGAC
CGAGTCGATG GCAAACTGCA AGCTGAAGTC GGGCTTAAGT GGGTCGACAG TCATCATCCT
TATGCCAATC TGACTCCTGG TGACAATGTG TTTGTTATTC GTAGTGCTTT TTACCAAGGT
AACCCACTGA TCATACGTGG GCCTGGTGCA GGCCGAGAAG TCACCGCCGC TGCGATTCAA
TCGGATCTGG TGCAGATCTG TAAGGATTTA CTGCAAGAGT AA
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| Protein sequence | MARSHLHKFG GSSLADADCY RRVAHILLTH GHSDDLVVVS AAGKSTNFLY KLLDLRDTGQ
LWQEELQVLI SFQQALIEQL LSNEQARDLR ERLSNDKAQL ASLLSLEQRN EYQISHVVSF
GERWSARLMA ALLRESGVAA SHVDACSILV ADEGAVPKIR VEESKAKIQT LLAERTNERL
VITGFICANA QGDTLLLGRN GSDFSATLIA SLADIGRVTI WTDVEGIFNA DPNKINDAKL
LKSMSLAEAD RLARLGSPAL HSRTLQPLFN TQVSLAVRSS YASHTDFTLI APQSSSASAP
VVTSLSQVVL FSFKLETHNK IESDSQSKPQ PQSQFESVLA ALTSAGLTPL AHWEYGADKH
ELAFMLENQK QVNALLSKQA PTFGITELQL NLDLGLVALV SADAEHFRRS FARLLSRDAK
PIYQDNLSLV TLVPRAQVNL LTQKVHRRCA GPKMRIGVLL LGVGNIGEAW VDLFRRANHA
LNNELEASVE LVGIVSSKKA LIAEQGIDLN HWQQIFAEKA CQWQYEQLFE RLDKLDCDEI
VALDISASAS LTLQYPELFA RGIHVVSANK LAGSGPLPFY KELKQQLSNR RLFWRYNASC
GAGLPIQHAL NDLRNSGDTI EAVGGIFSGT LCWLFENFDG KKSFSELVLE AKSLGLTEPD
PRDDLSGRDM QRKLLILARE IGLGIELDDI KLHSLVPSEL VDLPLDDFLA QIRSLDSDIL
QQYLSAAEQN KVLRYVASLD RVDGKLQAEV GLKWVDSHHP YANLTPGDNV FVIRSAFYQG
NPLIIRGPGA GREVTAAAIQ SDLVQICKDL LQE
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