| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0553 |
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| Symbol | |
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| ID | 4016927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 625836 |
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| End bp | 628409 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637954538 |
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| Product | Beta-N-acetylhexosaminidase |
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| Protein accession | YP_561566 |
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| Protein GI | 91791915 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTACTT TAAAAAGATT AATCCCTTTA GCTATTACAC TTTCTAGCTT TAACGCATTC
GCCAATTTTA GCCAAACAGA GTTAAACGAA TTTGCCGAAA AAACGAGCTG GTCATGGCAA
GTAATTGATA ACTATCATAA TGGCGATAAA TCGCATCTCG CCAATATTGA GCTAGTCAAC
CAATCTCGTG TTGATTTACC TAAAGGCATA GCTGACTGGG TGATCTATAC CAATGTTATT
CGCCCAATTC TAACGAAAAA GTCCCAAGGA TTGGCATTTC AATTTGTACA AGGAGATCTT
TATAAAATTA CCCCGACAGT AAACTTTAAA GGCCTTAAAG CTGGTGATAA GCTTACTATT
CCCTTTGAAG CCGAAAACTG GGCATCTTCT CATAGCGACT TTATGCCTCG AAGCTTTATC
ACTCAACACT CACTTACCCC AGCAATCTTC AGATCTACTG ATACCGAAGA TAGCAGCAAA
TACATAAAGC CACTCAATCG GCCAGAACAA TACCAACGTT ATAATACGCC TAGAGATCAC
TGGGAAAAGC CCACCAGCGC ATGGCGCTAT GACCGCTATA GCCCTGCTCA AGAATATGCG
CTTACAGAGG ATGATGCCAA GCGAGTGATC ATCCCTACCC CCAATAAAGT GAAGTACAGT
AGCTCTAGCA CTCTATTAAC TGCTGATTGG CAAATATCTT ATCAAGGAAG CTTAAAATCA
GAAGCTCACT TACTATCAGA AACATTAGAT AAGAAGCTAA AAGGTTCGCT AAAGATCACC
CCAAACAATC TGCCAGCTCA AGATAAAAAC CTTATTTCAT TATCTATTTA TAATGGTGAT
GAAAGCTGGA AGCCTGAGAG TTACAGCTTA GAAATTGAAA AAAATCGTAT TGAAATTGTC
GGCGCAGATA GCGCAGGTGT CTTTTATGCT ATTCAAAGTT TATTGAGTCT GACACCAAGC
GGCACGCAAT CTCAAATTGA ATTACCTCAA CTTAGCGCCA ACGATGCTCC ACATTTTGAA
TGGCGCGGCT TTATGTACGA TATGAGCCGT AATTTCCATG GCGTGGAGAT CACCAAAAAA
CTCATCGACC AAATGGCGCA TTACAAACTC AATAAGCTAC ATCTTCACTT AACTGAAGAT
GAGTCTTGGC GAATAGAAAT TGGCGGACTA CCAGAGCTGA CGGATTTAGG TAGCCAGCGA
TGTTTTGACC TATCTGAAAC TGAATGTATG TTGCCAACAA GAGGCTCGGG GCCTTTTAAA
ACGTCACAAA CAAATGGCTT TTACAGCAAA GAGGAGTTTA TCGATATTCT CAAGTATGCC
AAGCAAAGGC ATATTGAAGT CATCCCAGAG GTTGATATGC CAGGTCATGC CCGCGCAGCA
ATCAAGGCGA TGGAACTTAG ACACAATAAG TTAATAAAAT CTGGCGATAA AACCGGAGCT
AACGCCTATC TGTTGTCAGA TCCACTGGAT AAATCTGTGT ACTCAACAGC TCAGTTCTTT
AATGACAATT CCATCAATGT TTGTATGGAC TCCACCTATA ATTTTGTCGA TAAAGTGGCT
TATGAATTTC AACAAATGTA CCGCGAAGCA GGTTTAAAAC TCACGAATAT CCATATCGGT
GGCGATGAAG TCGGCGTAGG CTCTTGGACC GCGTCTCCTA TTTGTAATGC ATTATACCAA
GCTATAGATA GCGGCGTAAA AGGTCCTGCA GATCTTAAAG CCTATTTCAC TCGCCGCGCA
GCAGAAGTAT TAGCCGCGCG TGGGCTGAAT ATTGCTGCAT GGGAAGATGG CATTATGTTT
GACAGAATAA CACCTTTCCC TATCGAGCAA TTTGCTAATA ATAAAGTCTA CGTTAATGCT
TGGGATAATA TTTGGGAATG GGGTGTATCT GACCGCGCAT ATCGACTAGC AAATGAAGGC
TACCATGCGA TTCTTTCTAT GGGCACCCAC CTGTACTTTG ACCACCCGCA AGAGCCCGAT
CCAGCAGAAC GGGGGCTATA TTGGGCAGCG CGCTATACCG ATGTCGAAAA GGTATTTAAC
TTCATCCCTG ACAATGTATA CGCCAACGCT GACTTCACCC GTGCGGGTGA ACCCATTGAT
AACTTAGAAG ATCTAGTTGG ACGCGCTTTA CATCAGCTCA ATAAGCCTGA GAATATTGCT
GGTATTCAAG GTCAAGTTTG GAGTGAAACA ATTCGCACTC CCGAGCAATT AGGAGAAATG
ATTTTTCCGC GAATTATTGC CCTAGCTGAG CGAGGATGGC ATCGCAATAC AGTGCTTGCC
AGTGAGCAAC AAGAGCAAGC GCGTCAATGG GCTAAGTTTG CGAGTGTGCT CGCACTGAAA
GAGTATCCAA AGCTTGAAGA AGCTGGAGTA AGCTTTTACT TGCCAATTCC TGGTGCCAAA
CGTATCGACA ATCAAGTGCA TATAATCAGT CAATTACCTG GATTAACACT TGAGTACAGC
TTAGATAATG GAGAAAACTG GCAAGTGTAT AACAAGCCTA TACGCTTACC TGACGCCATA
AAAGTTCGCT CACGTTCAGG CAAGCATACG AGTCGTGTAG GAAGCTTTGA GTAG
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| Protein sequence | MATLKRLIPL AITLSSFNAF ANFSQTELNE FAEKTSWSWQ VIDNYHNGDK SHLANIELVN
QSRVDLPKGI ADWVIYTNVI RPILTKKSQG LAFQFVQGDL YKITPTVNFK GLKAGDKLTI
PFEAENWASS HSDFMPRSFI TQHSLTPAIF RSTDTEDSSK YIKPLNRPEQ YQRYNTPRDH
WEKPTSAWRY DRYSPAQEYA LTEDDAKRVI IPTPNKVKYS SSSTLLTADW QISYQGSLKS
EAHLLSETLD KKLKGSLKIT PNNLPAQDKN LISLSIYNGD ESWKPESYSL EIEKNRIEIV
GADSAGVFYA IQSLLSLTPS GTQSQIELPQ LSANDAPHFE WRGFMYDMSR NFHGVEITKK
LIDQMAHYKL NKLHLHLTED ESWRIEIGGL PELTDLGSQR CFDLSETECM LPTRGSGPFK
TSQTNGFYSK EEFIDILKYA KQRHIEVIPE VDMPGHARAA IKAMELRHNK LIKSGDKTGA
NAYLLSDPLD KSVYSTAQFF NDNSINVCMD STYNFVDKVA YEFQQMYREA GLKLTNIHIG
GDEVGVGSWT ASPICNALYQ AIDSGVKGPA DLKAYFTRRA AEVLAARGLN IAAWEDGIMF
DRITPFPIEQ FANNKVYVNA WDNIWEWGVS DRAYRLANEG YHAILSMGTH LYFDHPQEPD
PAERGLYWAA RYTDVEKVFN FIPDNVYANA DFTRAGEPID NLEDLVGRAL HQLNKPENIA
GIQGQVWSET IRTPEQLGEM IFPRIIALAE RGWHRNTVLA SEQQEQARQW AKFASVLALK
EYPKLEEAGV SFYLPIPGAK RIDNQVHIIS QLPGLTLEYS LDNGENWQVY NKPIRLPDAI
KVRSRSGKHT SRVGSFE
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