Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0513 |
Symbol | |
ID | 4017112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 582500 |
End bp | 583879 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637954499 |
Product | major facilitator transporter |
Protein accession | YP_561528 |
Protein GI | 91791877 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAGCC CTATGCGCAC TTTTACATCC TTATACAGCA CCACCTTCTT GATGGTGCTT GCCGCCGGCT TACTGACGAC TTATCTAGGC CTACGTTTGA CCGTGATGGC TGTGCCACAA TTATGGATTG GTGCCATGAT GTCCGCCTAT TATGTCGGCT TGGTGGCAGG TTCAAAGCTT GGCCATAAAC TTATCGCCCA AGTCGGTCAT ATTCGCGCCT TTGTAGCCTG TGCCGGGATA GTGACAGCCT CCGCATTGGG GCATGCATTA ATCGATGATT TGAGCGTTTG GTTAGTGTTA CGACTCTTTG TGGGTATGGG CATGATGTGT CAGTACATGG TGCTCGAAAG CTGGCTTAAT GAACAGTCGG ACGACAGTCA GCGCGGCACG GTATTTGCCA GTTACATGAT AGTGTCATAT TTGGGTTTAA TGGCGGGTCA AGGCGCCATC AGCCTCTATC CAGAGCTTGG CATAGAGCCG CTGCTGTTGA TTGCTATCTG CTTTTCCTTA TGCATAGTGC CCATTTCCAT TACTCGCCGT ATTCACCCTG CGCCCTTAAC TCCTGCACCA CTTAATATGT TGCTCTATTG GCGTAAAGCG CCCCAAGCAC TCACTACTGT CGCCCTAGGC AGTATGATTG TCGGCTGCTT TTATGGTTTA GCCCCCGCTT ATGCCAGCAG CCATGGGATA GCCCCAGAAG AAGTCGCGCT GTATATGTCA TGCACGATTT TAGCAGGACT ACTGGCGCAA TGGCCCATGG GTAAACTGTC CGATGTCATG CCAAGAAGCC GATTAATACG TATCAACTGC GCCTTATTAG GGATCTTAGT CTTTTTCATC GCCATGCTGC CATACAATGA AATCTATTCA TTGGCACTGA CGGGGTTATT TGGCATCTTG GCCTTTACCT TTTATCCCCT AGCCACAGCA CTGGCAAATT CACGAGTCAC ACAAGAAGAG CGTGTCGGCC TATCCGCCAC TATTCTCGTG ACTTTCGGTT TAGGTGCCAG TGTGGGCCCC TTAATTGCTT CTAGCTTGAT GCAAGCCTTA GGTGACGCCA TGCTGTATGT CTTTATGGGG GTTTGTGCTT TTGGATTGCT AATCGCCTTG CACTTTATTA ATAGCCGTCA GAAGAGTGAG CGCCAAGTGA GTGGGGATTA TGTGATGGGC GGTGGCGATC TGGTGCTTTC CCCTTACGCT GCGGCAATCG ATCCTAGGGT AGACATGGAG TCAGTTCAGG ATCAAATGAT CAACCCACAT GAAGAAGATA TTAACGCATT CGAATTTGAT GATGAACTGT CTGACTATGA GCCGATTGAA GATGATTTTA TTGATGATCA ATCAGAATAC GACATCGAGC CGAACAGTAA AGAAGCCTAG
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Protein sequence | MVSPMRTFTS LYSTTFLMVL AAGLLTTYLG LRLTVMAVPQ LWIGAMMSAY YVGLVAGSKL GHKLIAQVGH IRAFVACAGI VTASALGHAL IDDLSVWLVL RLFVGMGMMC QYMVLESWLN EQSDDSQRGT VFASYMIVSY LGLMAGQGAI SLYPELGIEP LLLIAICFSL CIVPISITRR IHPAPLTPAP LNMLLYWRKA PQALTTVALG SMIVGCFYGL APAYASSHGI APEEVALYMS CTILAGLLAQ WPMGKLSDVM PRSRLIRINC ALLGILVFFI AMLPYNEIYS LALTGLFGIL AFTFYPLATA LANSRVTQEE RVGLSATILV TFGLGASVGP LIASSLMQAL GDAMLYVFMG VCAFGLLIAL HFINSRQKSE RQVSGDYVMG GGDLVLSPYA AAIDPRVDME SVQDQMINPH EEDINAFEFD DELSDYEPIE DDFIDDQSEY DIEPNSKEA
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