| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0483 |
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| Symbol | ubiA |
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| ID | 4016666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 555602 |
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| End bp | 556510 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954469 |
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| Product | 4-hydroxybenzoate octaprenyltransferase |
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| Protein accession | YP_561498 |
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| Protein GI | 91791847 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial
[TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGGGCA TGACCTTTGG AAGAAATATG ACAGCACAGA CTCAGCAAAG CATAATGGCT
AAATTAGCCC TCTATGCCCA GTTGTCTCGC ATCGATAGGC CCATAGGCAC ATTACTGCTG
TTGTGGCCTT GTCTGATGGC GCTGCTCTTT GCTGCCAAGG GTATGCCCGA CATCAAGGTC
TTGCTCATTT TCATCTTGGG TGTGGTCATC ATGCGCGCTT GTGGCTGTAT CATTAATGAT
TATGCCGACC GCAACCTCGA TGCCCATGTC GAGCGGACCA AACAAAGACC GTTAGCCTCA
GGCGCCATCA GCAGCAAAGA GGCGTTAAGC TTGTTTGCGC TGTTAGGTCT GCTCGCTTTC
GCCCTAGTGT TACTGCTCAA CCCCTTGGTG GTAAAACTCT CTGTGGTTGG GATAGTACTG
ACCATAATGT ACCCCTTCAT GAAACGGGTC ACCAATATGC CACAGATGTT TCTTGGCATA
GTCTGGAGCT GGTCAATTCC CATGGCCTAC GCCGCACAGC TAGGTGAAGT CCCTGTTGAA
GCTTGGTGGT TATTTGCCGC CAACTGGTGC TGGACTGTGG CTTACGACAC CATGTACGCC
ATGATCGATA GGGATGACGA CCTTAAGGTC GGGATTAAAT CTAGCGCTAT TTTGTTTGGT
AGATTTGATA GGCAATGGAT AGCTGTGTTT CAACTCATGG CCTTTGGCTG CTTTTTGATG
GCAGGGCTTA GCGCCGAACG TGAGTTTATT TATGCCTTAG GTTTATTGGG GTTTATCGCC
TTTAGCGTCT ATCAACAGCG GCTAATTTTC AGCCGAGAAC GCCCCGCCTG CTTCAAGGCC
TTCCTTAATA ACAACTGGGT CGGCATGTTG CTGTTTCTGA CGTTAGCCGC AGATTACCTG
CTTTATTAG
|
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| Protein sequence | MTGMTFGRNM TAQTQQSIMA KLALYAQLSR IDRPIGTLLL LWPCLMALLF AAKGMPDIKV
LLIFILGVVI MRACGCIIND YADRNLDAHV ERTKQRPLAS GAISSKEALS LFALLGLLAF
ALVLLLNPLV VKLSVVGIVL TIMYPFMKRV TNMPQMFLGI VWSWSIPMAY AAQLGEVPVE
AWWLFAANWC WTVAYDTMYA MIDRDDDLKV GIKSSAILFG RFDRQWIAVF QLMAFGCFLM
AGLSAEREFI YALGLLGFIA FSVYQQRLIF SRERPACFKA FLNNNWVGML LFLTLAADYL
LY
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