| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0461 |
|---|
| Symbol | |
|---|
| ID | 4017232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 530512 |
|---|
| End bp | 531267 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637954447 |
|---|
| Product | ubiquinone/menaquinone biosynthesis methyltransferases |
|---|
| Protein accession | YP_561476 |
|---|
| Protein GI | 91791825 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAG GCGATTCTAA TAAGACACAT TTTGGCTATA AAACCGTTGA AGCCGATAAG
AAAGCCGATC TCGTCGCCAG TGTATTTCAC TCAGTAGCCG CGAAATACGA CATAATGAAT
GACGTGATGT CATTCGGTAT CCATAGATTT TGGAAGCGTT TCACCATAGA AACTGCAGCG
GCCAGACCTG GGATGAAAGT GCTAGACTTA GCCGGTGGCA CAGGGGATCT TACCGCCAAG
TTTTCTCATT TAGTGGGTGA ACGCGGTCAA GTAGTACTGG CCGACATCAA TGATTCCATG
CTAAAAGTCG GCCGCACTAA GCTCAGAGAC AAAGGCATAG TCAACAATGT CAGCTATGTA
CAAGCCAATG CCGAAGCACT GCCGTTCCCA GACAATCATT TCGATATCAT CACCATAGCA
TTCGGTTTAC GTAATGTGAC CGACAAGGAT GCGGCCCTGC GCTCTATGCT TAGGGTATTA
AAGCCAGGCG GCAAACTCTT AGTCCTAGAA TTTTCTAAGC CTCAGCACGA AATGATGCGC
AAAGCTTATG ATCTCTATAG TTTTAAAATT CTGCCTAAGA TGGGTGAAAT CATCACTAAA
GATGCTGACA GCTATGAATA CCTTGCCGAA TCAATCCGCA TGCACCCAGA TCAAGACACC
CTCAAGGAAA TGATGCAAAC CGCGGGGTTT GAGCAAGTGG ACTACACCAA TATGACCGAT
GGTATTGTCG CCCTGCATAA GGGATATAAG TTCTAA
|
|---|
| Protein sequence | MSEGDSNKTH FGYKTVEADK KADLVASVFH SVAAKYDIMN DVMSFGIHRF WKRFTIETAA
ARPGMKVLDL AGGTGDLTAK FSHLVGERGQ VVLADINDSM LKVGRTKLRD KGIVNNVSYV
QANAEALPFP DNHFDIITIA FGLRNVTDKD AALRSMLRVL KPGGKLLVLE FSKPQHEMMR
KAYDLYSFKI LPKMGEIITK DADSYEYLAE SIRMHPDQDT LKEMMQTAGF EQVDYTNMTD
GIVALHKGYK F
|
|---|
| |