Gene Sden_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0448 
Symbol 
ID4017219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp519163 
End bp519489 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content40% 
IMG OID637954434 
Productthioredoxin 
Protein accessionYP_561463 
Protein GI91791812 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATA AAATTGTATA CCTAAGCGAT GACAGCTTTG AAAATGACGT CCTAAAATCA 
GAATTACCAG TATTGGTAGA TTTTTGGGCT GAGTGGTGTG GCCCTTGTAA AATGATCGCG
CCAATCTTAG ATGACGTTGC CCAAGAGTAT GCAGGCCGAG TAACGGTAGC TAAATTAAAT
GTTGACCAAA ACAACGTTTC TCCAGCTAAA TACGGTGTTC GTGGCATCCC AACTTTGTTG
ATGTTCAAAG GCGGTGAGTT AGTGGCAACT AAGGTTGGCG CACTATCAAA AACTCAATTA
AAAGAATTTA TGGATGCACA AATCTAA
 
Protein sequence
MSDKIVYLSD DSFENDVLKS ELPVLVDFWA EWCGPCKMIA PILDDVAQEY AGRVTVAKLN 
VDQNNVSPAK YGVRGIPTLL MFKGGELVAT KVGALSKTQL KEFMDAQI