Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0448 |
Symbol | |
ID | 4017219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 519163 |
End bp | 519489 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637954434 |
Product | thioredoxin |
Protein accession | YP_561463 |
Protein GI | 91791812 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATA AAATTGTATA CCTAAGCGAT GACAGCTTTG AAAATGACGT CCTAAAATCA GAATTACCAG TATTGGTAGA TTTTTGGGCT GAGTGGTGTG GCCCTTGTAA AATGATCGCG CCAATCTTAG ATGACGTTGC CCAAGAGTAT GCAGGCCGAG TAACGGTAGC TAAATTAAAT GTTGACCAAA ACAACGTTTC TCCAGCTAAA TACGGTGTTC GTGGCATCCC AACTTTGTTG ATGTTCAAAG GCGGTGAGTT AGTGGCAACT AAGGTTGGCG CACTATCAAA AACTCAATTA AAAGAATTTA TGGATGCACA AATCTAA
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Protein sequence | MSDKIVYLSD DSFENDVLKS ELPVLVDFWA EWCGPCKMIA PILDDVAQEY AGRVTVAKLN VDQNNVSPAK YGVRGIPTLL MFKGGELVAT KVGALSKTQL KEFMDAQI
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