Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0436 |
Symbol | |
ID | 4017970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 506071 |
End bp | 506559 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637954422 |
Product | hypothetical protein |
Protein accession | YP_561451 |
Protein GI | 91791800 |
COG category | [S] Function unknown |
COG ID | [COG2862] Predicted membrane protein |
TIGRFAM ID | [TIGR00645] conserved hypothetical transmembrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00784425 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAG TGTTTGAAAA ATTGATGTAC GCATCGCGCT GGATCATGGC GCCTATTTAC TTAGGCTTAA GCCTCATCTT ATTTGCCTTA GGCATAAAGT TCTTTCAAGA AATTTTTCAT CTCATCCCCA ATATCTTCGA GATAGCTGAA GTGGACTTAG TGCTTATCAC ACTGTCACTT ATAGATATCA CTTTAGTGGG TGGTCTGCTC ATCATGGTGA TGTTTTCGGG CTATGAAAAC TTCGTCTCAC AACTCGATGT GGGTGAAAGC AGTGAAAAAC TCAACTGGCT TGGCAAGATG GACGCTGGCT CCCTTAAAAA CAAGGTGGCC GCCTCTATCG TGGCGATTTC ATCCATTCAC CTGCTAAAGG TATTTATGAA TGCCGAAAAT ATCGCTAACG ACAAGATCAT GTGGTATTTG CTCATTCACA TCACCTTTGT GCTATCCGCC TTCGCCATGG GCTATTTGGA TAAAATCACC CGTAAATAA
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Protein sequence | MEKVFEKLMY ASRWIMAPIY LGLSLILFAL GIKFFQEIFH LIPNIFEIAE VDLVLITLSL IDITLVGGLL IMVMFSGYEN FVSQLDVGES SEKLNWLGKM DAGSLKNKVA ASIVAISSIH LLKVFMNAEN IANDKIMWYL LIHITFVLSA FAMGYLDKIT RK
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