Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0421 |
Symbol | groES |
ID | 4017843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 493178 |
End bp | 493468 |
Gene Length | 291 bp |
Protein Length | 96 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637954408 |
Product | co-chaperonin GroES |
Protein accession | YP_561437 |
Protein GI | 91791786 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0234] Co-chaperonin GroES (HSP10) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000118204 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATATTC GTCCATTACA CGACCGCGTA ATCGTTAAAC GTTTAGAAGT TGAATCAAAA TCGGCTGGTG GCATAGTCCT AACCGGAAGC GCAGCTGAAA AGTCGACTCG CGGTGAAATC TTAGCAGTAG GCAATGGCCG TCTGTTAGAG AATGGCACAG TTAAACCACT TGACGTTAAA GTGGGCGACG TTGTGATCTT CAACGAAGGT TATGGCGTGA AGAAAGAAAA AATTGACGGC GAAGAAGTGT TAATCCTGTC AGAAGCTGAC CTGATGGCTG TAGTGGGTTA A
|
Protein sequence | MNIRPLHDRV IVKRLEVESK SAGGIVLTGS AAEKSTRGEI LAVGNGRLLE NGTVKPLDVK VGDVVIFNEG YGVKKEKIDG EEVLILSEAD LMAVVG
|
| |