Gene Sden_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0392 
Symbol 
ID4017526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp460577 
End bp461197 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content44% 
IMG OID637954377 
Producthypothetical protein 
Protein accessionYP_561410 
Protein GI91791759 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGTTCG ATGCCGCCAT GGATGAGCAC ATAGTGCGTG AATATTTGCT GGATAACCCA 
GACTTTTTCA ATCGCTACCC TGAGTTATTA TTGTCACTCC AGTTACCTCA CCAAGAGCGG 
GGGACAGTTT CTTTAGTTGA GCGTCGCCAA GAGGTACTGC GTCAGCGAGT TACCCAGCTA 
GAGGAAGAAA TCACTTCTTT GATGGTTTGC GCGCAAGAAA ACGAGAAAAT ATTCCATTTT 
AATAATGATT TATCCCACAA ATTATTGGCC TGTGAAGACT TAGGTGAACT CAGGCAAGTG 
CTGTCAGAAG GGCTAAAACA TCACTACGGC TTTAGCCATG TTAGGTTAAT CACAGTGCAT 
GATATCGACA GTGAGTTGGC CAATATTTGG CGTCATCGTA TTTCGTTGGG CCATTATTTT 
GGCCGTTTGA CTCAGTCTGA GTCTAAACGC TTATTCGGCG GTGAAGTGGG ATCTGTGGCA 
CTGACTAAGC TGTCAGATGA GAATGGCCAG GTTATTTTTG CTGTCGCCAG TCCTGACTCG 
ACTCATTTTC ACCCAGGAAT GGATAATTTA TTTTTTGATC AGTTAAGACG TTTACTGGAT 
CACATGCTGC CTAAGTTCTA G
 
Protein sequence
MQFDAAMDEH IVREYLLDNP DFFNRYPELL LSLQLPHQER GTVSLVERRQ EVLRQRVTQL 
EEEITSLMVC AQENEKIFHF NNDLSHKLLA CEDLGELRQV LSEGLKHHYG FSHVRLITVH 
DIDSELANIW RHRISLGHYF GRLTQSESKR LFGGEVGSVA LTKLSDENGQ VIFAVASPDS 
THFHPGMDNL FFDQLRRLLD HMLPKF