| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0383 |
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| Symbol | |
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| ID | 4017517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 437702 |
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| End bp | 439885 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637954368 |
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| Product | ABC transporter related |
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| Protein accession | YP_561401 |
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| Protein GI | 91791750 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAGCAA TTGCCCCTAA AAGCCAAGAA CAATGGACCA TATCAGCCTC TCAGAAAGTG
ACTGTGGATC CCCTTCTTGA TTCTCTTGTG CTACTTACAG ACCATTTTGG CAGTCCCTGC
TCGAGTGATT CACTGACTGC AGGCTTGCCT TTAAATAGCG CAATCATTAC GCCAGACTTA
TTACCACAAG CCGCAGCTAG AGCGGGTCTT GCGGCAAAAT TATCCCGTAA AGATCTCAAT
CAAATGACAG GGCTGATGAT GCCCTGCATT TTGTTATTAA AAGACAAAAA AGCCTGTGTG
TTAAGGGCGC TGGATCTTGA TGGTGATAAA GCGACTATTC AGCTACCAGA AACAGGCGGG
GAAGAAATAT TAACCTTAGG TGATTTAGAG TCACTTTATG TCGGTTATTT ATTTTTAGTC
AAGCAAGAGT ATCGCGGTGA TAAGAGTTTT GACGTTCACT TACATGACAA CACAACTCAC
TGGTTATGGC AGACGGTAAA AGAGTCCGCG CCCATTTATA GAGATGCTTT AATTGCTTCT
GTATTAGTCA ACCTATTTGC CCTAGTGTCG CCACTGTTTA TCATGAATGT TTATGATAAG
GTCGTGCCTA ACCTTGCATT TGAATCCTTA TGGGTGTTAG CCATAGGTGC CGGGATAGCC
TATATTTTTG ACTTTATTAT GCGGCAGCTT CGAAGCTATT TAATCGACGT GGCAGGCAAA
AAAGTCGATA TTATCGTCTC TTCAAAACTA TTTTTTAAAG CCATTGGTAT TCCTCTATCT
AAACGCTCGC CAAGTGTCGG CGGTACAGCA AGGCAGCTAG GTGAATTTGA TAGTATTCGT
GAAATTTTAG CCTCCGCAAC CATCACGACA CTCGTTGATT TACCGTTCGC GATATTTTTT
ATCATCATTA TCTATATCGT TGCCGGCGAT CTAGCACTGA TCCCTGTTAT TGCCAGTATT
TTGATTATAG GTTTCACACT GTATATTCAG CCAAAACTCA AAGCGGCCAT AGAAGAAAGC
AACCGCTTCG CCAGTCTTAA GCATGGTCAT TTGATTGAAA GTTTAACGGC CATCGAGTCC
ATTAAAGCCA ACGGGGCTGA GGGATTAGTT CAAAAAAGCT GGCAACAGAT GATAGGCCAT
ACCGCAAATT GGCAATTAAT CACCAAAAAG CTCACTAACC ATGTGACCCA TGTTGCCAAC
TTCATCGTTC AATTCAGTGT TATTTGTATT GTCATTCTTG GGGTGTATCG AGTCGCTGAT
AATGAGATAT CCATGGGTGG CATTATTGCT GCGGTTATCT TAGCAAGCCG TGCGATATCG
CCAATGGCGC AACTGGCAGG CTTAATTACA CGTGGTAACC ATACAGCCAG TGCATTGAGA
CAACTTGATC AAATAATGAC GCAAGAGGAT GAATTTCAAA ATAAAGGCCA TCTTGCCAGT
CAGTACAGGT TACAAGGGAA AATTAGTGCC GATAATATTG CATTTTGCTT CCCAAATTCA
GAAAGGCCAG CCTTACACCC TATGTCCATG ACAATACAAC CAGGTGAACG AGTCGCCATT
ATTGGCCGCA ACGGTTCAGG GAAAAGTACG CTCGCTAAAA TGTTAGTGGG CTTATATCAG
CCCACCCAAG GTAGCCTAAG CTATGATGGA CTTGATTCTG GCCAAATTCA CCCTAGCGAC
CTGCGTAGAA ACTTTGGTTA TTTGCCGCAG GATGTGACCC TTTTTCATGG CACCATAAGG
GATAATATTT TATTTGGCAC CAGGCAAGTT ACCGAGCATC AGCTCATTAG AGCCGTGCAA
CTGTCTGGGG TTAGCATGTT CACAAACTTA GAATCTGAAG GCTTAGATCA ACAGGTTGGA
GAAGGCGGTT TATCCTTAAG TCGTGGCCAA CGCCAAACGG TTGCATTAGC CAGAGCAACA
CTTAACGATC CTCCTGTACT TATGATGGAT GAACCCACAG CCAGTCTAGA TGCTAGGGCT
GAAAAACAAT TTATTCGCTC TATGCAACAT GTATCAAAAG ATAGGACCTT ATTGCTTATC
ACTCATAAGA TGCATTTATT AAAATTAGTT GACCGAATAA TCGTCTTAGA TCGTGGGCAC
ATATTGGCCG ATGGACCGAA AAAAGAAGTA TTAGAGAAGC TCAATTATGG CTTACTCGCA
GGAGCACAAG CCAATGAGCA ATAA
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| Protein sequence | MSAIAPKSQE QWTISASQKV TVDPLLDSLV LLTDHFGSPC SSDSLTAGLP LNSAIITPDL
LPQAAARAGL AAKLSRKDLN QMTGLMMPCI LLLKDKKACV LRALDLDGDK ATIQLPETGG
EEILTLGDLE SLYVGYLFLV KQEYRGDKSF DVHLHDNTTH WLWQTVKESA PIYRDALIAS
VLVNLFALVS PLFIMNVYDK VVPNLAFESL WVLAIGAGIA YIFDFIMRQL RSYLIDVAGK
KVDIIVSSKL FFKAIGIPLS KRSPSVGGTA RQLGEFDSIR EILASATITT LVDLPFAIFF
IIIIYIVAGD LALIPVIASI LIIGFTLYIQ PKLKAAIEES NRFASLKHGH LIESLTAIES
IKANGAEGLV QKSWQQMIGH TANWQLITKK LTNHVTHVAN FIVQFSVICI VILGVYRVAD
NEISMGGIIA AVILASRAIS PMAQLAGLIT RGNHTASALR QLDQIMTQED EFQNKGHLAS
QYRLQGKISA DNIAFCFPNS ERPALHPMSM TIQPGERVAI IGRNGSGKST LAKMLVGLYQ
PTQGSLSYDG LDSGQIHPSD LRRNFGYLPQ DVTLFHGTIR DNILFGTRQV TEHQLIRAVQ
LSGVSMFTNL ESEGLDQQVG EGGLSLSRGQ RQTVALARAT LNDPPVLMMD EPTASLDARA
EKQFIRSMQH VSKDRTLLLI THKMHLLKLV DRIIVLDRGH ILADGPKKEV LEKLNYGLLA
GAQANEQ
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