Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0379 |
Symbol | |
ID | 4017513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 433437 |
End bp | 434150 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637954364 |
Product | hypothetical protein |
Protein accession | YP_561397 |
Protein GI | 91791746 |
COG category | [S] Function unknown |
COG ID | [COG3672] Predicted periplasmic protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGTCTTAT TTACCAAGCT GAAAACTAAA TCTTTGAGTA GGAGAGCTTG TCAGATATCT CTGCTGACAT CGGTTCTATT AGGTTCATAC CTATATGCAT CTCCCACTCA GGAATTAAAT TCCGCAAAAA TTATTTCCAC CTTGACTGCA CATTATGGTG AAAGAGCAGG TTTGCGTGCT AAGGCTTGGT TTCAGGTGTT AAGCAAAGCC GAACATGTCG ACGAACAAGA AAAGCTAAAG ATGGTAAATC AGTTTTTCAA TTTATTTCGA TTCGTAGAAG ATAAAACCCT ATGGGGAGAT TCAAATTACT GGGCTACCCC GATGGAATTT ATCGGTGTAA ACGGTGGAGA CTGTGAAGAC TTCTCCATTG CTAAATATTT CACCCTGTTA CAACTGGGCG TAAGTGAAGA TAAATTGCGT ATTACTATGG TAAAAGCAAC CACTATGAAT CAATACCATA TGGTACTGGC TTATTACCCC ACGCCAAGTT CGATACCTCT GGTATTAGAT AACCTTGATC GTGAAATAAA ACCCGCAACT CAGCGTAATG ACTTATTACC TGTATACAGT TTCAACGGTA AACAGCTCTG GCTAAACAAA GAAAAAGGCC GTGGCGTTTT AGCAGGTTCT TCATCTCGAT TAAAGAAATG GAATGACCTA AAACACAGGT TAGGTGTCGA TAGACTGCGC CAACCAAAAT TAAAAATGGA GTAG
|
Protein sequence | MVLFTKLKTK SLSRRACQIS LLTSVLLGSY LYASPTQELN SAKIISTLTA HYGERAGLRA KAWFQVLSKA EHVDEQEKLK MVNQFFNLFR FVEDKTLWGD SNYWATPMEF IGVNGGDCED FSIAKYFTLL QLGVSEDKLR ITMVKATTMN QYHMVLAYYP TPSSIPLVLD NLDREIKPAT QRNDLLPVYS FNGKQLWLNK EKGRGVLAGS SSRLKKWNDL KHRLGVDRLR QPKLKME
|
| |