| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0360 |
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| Symbol | lpxC |
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| ID | 4017883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 402712 |
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| End bp | 403632 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954341 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_561378 |
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| Protein GI | 91791727 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000238422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTTTC AAAGAACTGT TCAAAAAATG GTACAGACCA CTGGTGTTGG ATTACATTCC
GGCAACAAGG TGACGCTGCG CATTATGCCT GCCCCCGTTA ATTCTGGGAT AGTACTGACA
CGTACCGATC TCAGCCCTGC AGTGTCTATC CCTGCAAAGG CGGAGTTAGT GCGTGAAACT
ACTATGTGTA CCGCACTTGT GAATGACGCG GGTATTCGTA TCTCAACCAT AGAACACCTA
TTCGCAGCCT TAGCTGGACT TGGCATAGAT AACGCTGTTA TCGAAGTCGA TGCCCCTGAA
ATCCCTATTA TGGATGGCAG TGCCAGCCCC TTTGTGTTTT TATTGCAAAG TGCGGGAATT
AAAGAGCAGG CTGCGGCAAA GAAATACATT AAAATCAACA AGACAATACG TGTTGAAGAC
GGCGATAAAT GGGCTGAATT GAAGCCATTT AAAGGCTTTA GAGTTAATTT TAAAATTGAC
TTTAATCATC CTGAAATTGC CCGTAGTCAG CAGCATATGG TGATGGACTT TTCGACCTCT
GCGTTTGTAA AAGACATCAG CCGTGCCCGT ACTTTTGGTT TTATGCGCGA TATCGAGTAC
TTGCGTGCTA ATAATCTCGC CCTGGGTGGC AGCATGGAAA ATGCGGTTGT GTTGGATGAA
TACCGCGTCC TCAACCCCGA TGGTCTGCGT TATGAGGACG AGTTTGTAAA ACACAAAATT
CTAGATGCGT TCGGTGATCT GTATGTAGCA GGTCATGCGA TAGTCGGAGA GTTTTGTGCA
TTCAAAACCG GCCATGCGCT GAACAACCAG TTAGTTAGAG CCTTATTAGT ACAGCAAGAT
GCTTGGGAAT TGGTGAGCTT CGATAAAGAA GCCGATGTGC CTGTGAGCTT TATGGTGCCA
GGCACTCAAG CCTTCGCATA G
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| Protein sequence | MIFQRTVQKM VQTTGVGLHS GNKVTLRIMP APVNSGIVLT RTDLSPAVSI PAKAELVRET
TMCTALVNDA GIRISTIEHL FAALAGLGID NAVIEVDAPE IPIMDGSASP FVFLLQSAGI
KEQAAAKKYI KINKTIRVED GDKWAELKPF KGFRVNFKID FNHPEIARSQ QHMVMDFSTS
AFVKDISRAR TFGFMRDIEY LRANNLALGG SMENAVVLDE YRVLNPDGLR YEDEFVKHKI
LDAFGDLYVA GHAIVGEFCA FKTGHALNNQ LVRALLVQQD AWELVSFDKE ADVPVSFMVP
GTQAFA
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