Gene Sden_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0349 
Symbol 
ID4017872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp388364 
End bp390109 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content51% 
IMG OID637954330 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_561367 
Protein GI91791716 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAC AAGCTAAGCT AAAAACAAAG AAGACTAATC CAGAACTCAT TCCATGGCGT 
TTATACGTAG TGGTGGGTTT TGTGTTTCTG CTATTTACCA GTTTGCTAGC CCGCGCTGCG
TTTATCCAAA TCATAGAGCC AGAAAAGCTA CGTTACGAAA GTGATATGCG TACCCTAAGA
ACCAGCAGTA ATCAGGTTCA ACGTGGGCTT ATTACCGACA GAAACGGAGA AATGTTGGCG
GTTAGCGTGC CTGTGATGGC GGTATGGGCC GATCCTAAGC ATTCCTTTGA TCAAAATGCC
TTCAAAGACA TGCGCCGCTG GCAAGCGCTG GCCGACGTGC TGCAAGAGCC GGTGGATGAG
ATTGTCAATA AGGTCAAACG GGATCCTAAG AAACGTTTTA TCTACCTTAA ACGCCAAGTG
ACTTCGGCTG TCGCCGATTA TATCAAGCAG TTAAAGATAG GCGGTATTTA CCTTAAAGCT
GAATCTCGTC GCTATTACCC CGCGGGTGAA ACTGCGGCGC AGCTCATTGG CATCACTAAC
ATTGACGATG TCGGCATCGA AGGCATAGAA AATACCTACA ATGATTGGCT GACGGGCACC
CCCAGCAAGC AGAGAGTGCG TAAATCTCGC GATGGCCAAG TGGTCGAGCG CCTTGATGTA
GTGGAAGAAG GCGCGAGCTC CAATGATTTA GTGCTCAGTA TCGATCAGCG ATTACAGCAG
CTGGCATATC GTGAACTTAA GCGCGCCACA GAAATTAACC AAGCCACCTC AGGTTCTGTG
ATCATCTTAG ATGTGCACAC GGGCGAAGTC ATGGCCATGG TCAACACCCC TTCATACAAC
CCCAATGCGC GTGACAATTT GCAATCTCAT CGCATGCGCA ACCGTGCCCT TACCGACACC
TTCGAACCTG GTTCTACGGT TAAGCCTTTT GCTATGGTCG CAGCCCTAGA AGCTGGGGCC
GTCAAGCTCG ATGATGTGAT TTCAACCTCA CCAGGCTGGA TGAGGGTGGG CGGCCGTCAG
GTACGCGACC CCGTTAATTA CGGCGACATG TCGTTAGCGA AAATTTTGGT TAAATCCAGC
AACGTCGGCA TCAGTAAGGT GGCCTTATCT ATCCCAGTTG AGCAGCTACT TGGCACCTAT
CAGGCCATGG GGCTAGGTAA TTATTCAGGC ATTAACCTTG CGGGGGAAAG TGCAGGGGTG
ATTCATGATC GACGCCGTTG GTCTGATTTT GAACGGGCGA CCTTATCTTA CGGTTACGGC
TTAACTGCCA CCCCGCTGCA ATTGGCACGC ATGTATGCGA CTTTAGGCAA CGGCGGAATT
TCCTACCCTG TTTCGGTGTT GAAACTTAAG CAGGCGCCTC AGGGCGAGCG GGTTATCGAT
GAGAAAGTGG CTCGAGATGT GATGCAAATG CTGGTGGGCG TGACTGAAAA AGGCGGCACT
GCAACTCAGG CACATATCGA CGGTTACCCT ATCGCGGGTA AAACGGGCAC CAGCCGTAAG
GCGGTCGCCG GTGGTTATGG TGATAACTAT ATGTCACTGT TTGCAGGGGT TGCGCCTGTG
CATAACCCAA GGCTTGCCAT TGCGATAGTG ATCAACGAGC CAAAGGGTGA CCGTTATCAT
GGCGGCGATG TGGCAGGACC TGCCTTCGGC AAAATAATGT CGGCGGCCCT GCAAATGTTA
AATGTGGAGC CCATAACCGA GCGCGAGCAA GTGCAACTTG CCGCAGCACC TAGGAGGGCT
CAATGA
 
Protein sequence
MAKQAKLKTK KTNPELIPWR LYVVVGFVFL LFTSLLARAA FIQIIEPEKL RYESDMRTLR 
TSSNQVQRGL ITDRNGEMLA VSVPVMAVWA DPKHSFDQNA FKDMRRWQAL ADVLQEPVDE
IVNKVKRDPK KRFIYLKRQV TSAVADYIKQ LKIGGIYLKA ESRRYYPAGE TAAQLIGITN
IDDVGIEGIE NTYNDWLTGT PSKQRVRKSR DGQVVERLDV VEEGASSNDL VLSIDQRLQQ
LAYRELKRAT EINQATSGSV IILDVHTGEV MAMVNTPSYN PNARDNLQSH RMRNRALTDT
FEPGSTVKPF AMVAALEAGA VKLDDVISTS PGWMRVGGRQ VRDPVNYGDM SLAKILVKSS
NVGISKVALS IPVEQLLGTY QAMGLGNYSG INLAGESAGV IHDRRRWSDF ERATLSYGYG
LTATPLQLAR MYATLGNGGI SYPVSVLKLK QAPQGERVID EKVARDVMQM LVGVTEKGGT
ATQAHIDGYP IAGKTGTSRK AVAGGYGDNY MSLFAGVAPV HNPRLAIAIV INEPKGDRYH
GGDVAGPAFG KIMSAALQML NVEPITEREQ VQLAAAPRRA Q