Gene Sden_0327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0327 
Symbol 
ID4020343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp365355 
End bp365675 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content43% 
IMG OID637954308 
Productribosomal protein L28 
Protein accessionYP_561345 
Protein GI91791694 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0227] Ribosomal protein L28 
TIGRFAM ID[TIGR00009] ribosomal protein L28 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0383291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCCTC TTTGTGCCTC GGGCGACGGC CATACGAGGC ACATTAATGC TCGAGCGTTA 
AAAATTGTTT TGGAGAAGAT TGACATGTCA AGAATATGCC AAGTAACTGG CAAGAAGCCA
ATGGTTGGTA ACAACCGTTC GCACGCAAAA AATTCGACTC GTCGTCGTTT TTTACCTAAC
CTACAAAACC ACCGTTTTTG GTTAGAAGAA GAAAAGCGCT TCGTGCAATT ACGTGTATCT
ACTAAAGGTA TTCGTATTAT CGACAAGAAA GGTATCGAAG TAGTTGTTAA AGAACTTCGT
GCCCGTGGCG AGAAGGTATA A
 
Protein sequence
MRPLCASGDG HTRHINARAL KIVLEKIDMS RICQVTGKKP MVGNNRSHAK NSTRRRFLPN 
LQNHRFWLEE EKRFVQLRVS TKGIRIIDKK GIEVVVKELR ARGEKV