Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0326 |
Symbol | radC |
ID | 4020342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 364641 |
End bp | 365318 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637954307 |
Product | DNA repair protein RadC |
Protein accession | YP_561344 |
Protein GI | 91791693 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0170314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATTA AGGATTGGCC TCAAGGTGAA GGTCCAAGAG ATAAACTGCT GCAACAGGGA GCGGCGCGGC TTAGTGATGC AGAATTGCTG GCAGTGTTAA TTAGAAATGG CATCTCAGGC CAAAATGCAC TCACCACGGG ACGATTATTG CTCAGTCATT TTGGTGGTTT GCGCAGTTTA ATGACGGCGA CTGAGGACAA AGTATGTCAG ATCCCAGGTG TTGGACCGGT AAAATATGCT CAATTACAGG CCGCAGCCGA GATTTCTAAG CGAATTTCTC GTGAAAATCT ACAAAGAGGG CAAATTTTGA CAAATCCTGA TTTAACTCGG GACTATTTAA TGAGACAATT AGCAGACCGC TCCTATGAAG TGTTCGCCTT ATTATTGTTG GATAGCCAAC ATAGAGTGAT CCAATTTGTA GAATTGTTCC GTGGTACCAT AGATTCAGCC TCAGTTTATC CCCGTGAAGT GGTGAGCTTA GTGTTAGAAA AAAGGGCTGC GGCGGTTATC ATATGTCATA ATCACCCGTC TGGTATCGCT GAGCCCAGTC AGGCCGATAG GCGAATAACT GAGCGATTAA AAAATGCATT GGCAACTATT GATGTTTCTT TGTTAGATCA TATGGTTGTT GGTGATTTTG AAATAGTATC CTTCGCAGAG CGAGGTTGGT TAAATTAA
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Protein sequence | MAIKDWPQGE GPRDKLLQQG AARLSDAELL AVLIRNGISG QNALTTGRLL LSHFGGLRSL MTATEDKVCQ IPGVGPVKYA QLQAAAEISK RISRENLQRG QILTNPDLTR DYLMRQLADR SYEVFALLLL DSQHRVIQFV ELFRGTIDSA SVYPREVVSL VLEKRAAAVI ICHNHPSGIA EPSQADRRIT ERLKNALATI DVSLLDHMVV GDFEIVSFAE RGWLN
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