Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0324 |
Symbol | dut |
ID | 4020437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 362861 |
End bp | 363319 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637954305 |
Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
Protein accession | YP_561342 |
Protein GI | 91791691 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0756] dUTPase |
TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000247962 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACTC CTATAGAAGT CAAAATTCTC GACCCGCGTA TAGGAACCCA GTTCCCATTG CCAGCCTACG CCACCCCAGG CAGTGCTGGC ATGGATTTAC GCGCCATGGT AGACACTGAG CTCACACTCG CACCCGGTGA GACTAAGCTC ATCCCCACAG GTATCGCCAT CCATGTGGCC GACCCAAGCC TTGCCGCGGT CATCTTACCG CGATCAGGTC TAGGCCATAA ACATGGCATA GTACTGGGTA ATTTAGTGGG TCTAATCGAC TCGGATTATC AAGGCCCCTT AATGGTGTCT TGCTGGAATA GAAGCGATAC GCCCTTCACC CTAACCTTAG GTGAGCGGCT TGCACAATTG GTATTCGTGC CTGTGGTTCA GGCGCAATTT ACCTTAGTGG ACGAGTTTGA ACGCTCAGAT CGTGGTGAAG GCGGATTTGG TCATTCAGGT ACCCAATAG
|
Protein sequence | MKTPIEVKIL DPRIGTQFPL PAYATPGSAG MDLRAMVDTE LTLAPGETKL IPTGIAIHVA DPSLAAVILP RSGLGHKHGI VLGNLVGLID SDYQGPLMVS CWNRSDTPFT LTLGERLAQL VFVPVVQAQF TLVDEFERSD RGEGGFGHSG TQ
|
| |