| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0308 |
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| Symbol | |
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| ID | 4020421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 343856 |
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| End bp | 347116 |
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| Gene Length | 3261 bp |
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| Protein Length | 1086 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637954289 |
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| Product | hypothetical protein |
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| Protein accession | YP_561326 |
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| Protein GI | 91791675 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTA TTTTTGATAT CGAAGTGGCA AAAAATCACA TTAATAATGC AATATTACTC
GTTAAAAATA AAGCTTCTGA AGCCAAGGTA CGTGATTCAT TTTCCCAGTA CCTCCCTCAA
ATGTTCCCTG AAGCACCTTG GTGGGTCAAA TATCATGCAC TGGGGAGTGA AGAGCACGTA
AAATTTCATA AAAATGGAAA GGTGCGTTCA GGGTTTGTTG ATACCCTTAT TGGTGCGACT
GTAATTGAAT ATGAAAAAGA CCTTACTGTA CAAACAATTT TTGAAGCAGG TTATGGACAA
GTAAAGGATT ATTGTGCATC ACTTCTTAAT AAAAACCACA ATAAAGAAAT TATTATCGGA
GTACTTTCGG ATACCGTTAG ATGGCATGCC TATCGAATTT CTGAAGTATT ACCTCTTTCA
TATATTGCAG GTGCTACAAC ATACGGACGA GAACATGTTG TACTGGAAGA ATTGGAACAA
GTTGATCTTT CAAGAAATGC TGATGATGCA TTATCTCTCT ATTATTTTTT AACACGGTAT
CTCGGTCGAG AGGGTGCTAG GCCTCTTGGC GCGAAAACTT TATCTTTTGA CTTAGGATTC
GAAAGTACTT TCTGTGCGCA ACATATTAAT GCTGTTCGAG ACATAGTAAC GCAAGCATTT
GAAAGTAACA AAAAATATTC AGATCTGATT AAAAAGCTCT GGATTGATTT TGTTTCTTAT
ATTGGTGATT CTGAAGATAC AAAATCATTC GATGAAGAGT CCTATATTTC TGAACTTTAC
ATGCTAACTC TTGCAAAATT ACTTTGCGCC AATGTGTTAG AAAGCAAAGC TTTGAAAAGT
GACAATGCAG AAATAGAGTC CATTTTGAAT GGTTCCTTTT TTAAAGCTAA AGGCTTAACA
AATCTTGTTG AATATGACTA TTTCGGCTGG CTAAATGATA CGCCATATGC AATTCATTTA
ATTCCAATAG CGAAAGACAT TCAAAGTGAT TTAAGAGCAT ATGATTTTAA ATCAGTACCT
GAAGAAGACT TGTTTGGTAC ATTGATGGCT CAATTAGCCA GAAGATCGCA TCGTATATTG
TTAGGTCAAG AATGGACGCC TGCTTGGCTA GCTCAAAAGG TTGTAAAAAA TGTTTTTGAT
AAGTTACCTG AAAACGTTGA TCCACTATTA GTTGATATGT GTTGTGGATC TGGGGCAATG
GTAATAGAAG TTGTTAAACA GAGCAAACAC CGACTCATGA AATTAGGTGT ATCTGCCAGC
AATGGTGGGA TGATACGACT ATCTAAAGCA ATAACAGGGT TTGATATCGA CCCTCTCGCT
GTAATGTTGG CCAAAGTTAG CTGGGTATTG GCTGCTCGCG ATTGGTTCGG TGGTCTAGAT
GCTGGTGAAA TAGCAATACC AATTTACCAC GCTGACTCAT TATTTGCTGT TACACCTATT
TCAAAAATTA ATGACTTAAA AAAAGAAGAG AAATTCCACA CTCTTTCACT TGATAACATA
GAAATTAATC TTCCAGCATT TCTCATCACA CCAGAATGTA GAATGCTGTT TGAAATGATT
ATCGATAGAG GTTATGAAAT TGCGATGTAC AGTGCTGACC AAGAAAAGTC TGCTATTACA
AAAAAAATAA CTGATAATAT GGTCAATAAA TTACTAAATG AGAGCAGTTC AGTCTTATCT
TTAGCAGATA TCACTTCAGT TAAAGATTTT TCTCATGATT TACTGAATGC ACTAGATCAA
CTTCAACGTG ATGGACGAAA TGGAATTTGG GCATTTGTAC TAAGAAATAG CTATAGACCA
GGACTTGTTG CGGGTCAATT TAACGGTGTT GTTACAAACC CTCCTTGGTT AGCATTAAGT
AAAGTAGCAA ATAATCCATA CAAAAATGCT TTACGTCAGA GAGCTGAAAA CTATGGGATT
AAACCTGAGG GTTCATCTCA CTTACATATT GAGATGGCCA CTGTATTTCT TTTACATGCC
ATTGAAAGGT ATCTTCTAGA AAATGCTGTT ATTGGTTGTA TCCTCCCTGA TAGTGTACTT
AACGCGCATC ATCACAACTT ATTTAGAAAA GGAAATTATC TAAATTCACA CCGTGCTGTT
ACTTTTGATG TTAATGAACT TTGGCGTATA GAAAAGGGAA CTTTCAAAAA TGAAGCTATA
GTTCTTTACG GTAAAAAATG TAAGCATGAA TCCAGAGAGT TTTTTGATGG AAAAATTGTG
AGCCCATTAA GTTCTTCTGA CTTAACATTT CATAATGTTC AACAAGGAAA TAGAACTGCT
TGGACAGATA AAAAAGTAAT AGGGAAGGCA AAGTTTGGTT TGTATAACCC TGCTAGTTTT
AATCAAGGAC CTGATATCAT GCCACGCACT CTCATATTCC ATGATTTCAC TCCAGGAACA
CAACATACTC CGAAATGGAA AATTAGCCCA ATAGATCGGA CAGTAAGTGA TTTTAGATAT
TTAGTTACTC AAGCGAAGAA GCATAAGCAT TTTACACTTA ATGCAGACTC TGTTAGTGAC
ACATTCATTT ATGACATTTT ACTATCAAAT CATTTAACTC CATTTGGTAT TTCGACTCCA
GCAAAAGGTT TATTACCCAT ACTAAAAGTT GACAATGGAA CTTGGGAATC GGTATCGGAA
ATTGATCTAT CTTCATTTTC CTATGGCACC TATTCTGCTT TTAAAAAAAT ATTCAAAGAG
TCTAGAACAA CATCCGCTGA GTTTTTTGAC AAACTAAATA CAAATAGAGG AAAACTAGTC
TCACAAAATA TACCAACACA TGGATGGTTA ATTCTCTATG GTGCGGGGGG GAGTAATGTA
TGTTCTACTT ATATTAAGTC TAATGCTTAT TCACAAAACA AATTAATTAT TGACCAAACT
TTATATTGGT CTCACGTTCA ATCAGAAGAA GAAGCTTTAT ATCTTACAGG TTTACTAAAT
AGTGAAGCTG TATGCCTGGT TATAAAGGAA TTTCAACCTC GTGGGGCTTT TGGTGAAAGG
CATATTCACA AACTTCCGAT TGGTGCAACA CCACCATACA ATCCAATGGA TATAGTTCAC
ATAGAAGTTG TAGCGACAAC TAAACAGCTT ATGGTTGATT GGGATAATTT TAAAAAGTCT
ATTCCTGATG AGATTATGCA ACTCCTAAAT CCCAATTCAT CTTCATTATC TATCCGTCGA
AGAAAAATTA GAGAAAAAAT AAAAAATTTA CCAAGCTATC CTGCATACGA GCAAGCATGT
AGAGATTTAT ACGGTTTATA G
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| Protein sequence | MDIIFDIEVA KNHINNAILL VKNKASEAKV RDSFSQYLPQ MFPEAPWWVK YHALGSEEHV
KFHKNGKVRS GFVDTLIGAT VIEYEKDLTV QTIFEAGYGQ VKDYCASLLN KNHNKEIIIG
VLSDTVRWHA YRISEVLPLS YIAGATTYGR EHVVLEELEQ VDLSRNADDA LSLYYFLTRY
LGREGARPLG AKTLSFDLGF ESTFCAQHIN AVRDIVTQAF ESNKKYSDLI KKLWIDFVSY
IGDSEDTKSF DEESYISELY MLTLAKLLCA NVLESKALKS DNAEIESILN GSFFKAKGLT
NLVEYDYFGW LNDTPYAIHL IPIAKDIQSD LRAYDFKSVP EEDLFGTLMA QLARRSHRIL
LGQEWTPAWL AQKVVKNVFD KLPENVDPLL VDMCCGSGAM VIEVVKQSKH RLMKLGVSAS
NGGMIRLSKA ITGFDIDPLA VMLAKVSWVL AARDWFGGLD AGEIAIPIYH ADSLFAVTPI
SKINDLKKEE KFHTLSLDNI EINLPAFLIT PECRMLFEMI IDRGYEIAMY SADQEKSAIT
KKITDNMVNK LLNESSSVLS LADITSVKDF SHDLLNALDQ LQRDGRNGIW AFVLRNSYRP
GLVAGQFNGV VTNPPWLALS KVANNPYKNA LRQRAENYGI KPEGSSHLHI EMATVFLLHA
IERYLLENAV IGCILPDSVL NAHHHNLFRK GNYLNSHRAV TFDVNELWRI EKGTFKNEAI
VLYGKKCKHE SREFFDGKIV SPLSSSDLTF HNVQQGNRTA WTDKKVIGKA KFGLYNPASF
NQGPDIMPRT LIFHDFTPGT QHTPKWKISP IDRTVSDFRY LVTQAKKHKH FTLNADSVSD
TFIYDILLSN HLTPFGISTP AKGLLPILKV DNGTWESVSE IDLSSFSYGT YSAFKKIFKE
SRTTSAEFFD KLNTNRGKLV SQNIPTHGWL ILYGAGGSNV CSTYIKSNAY SQNKLIIDQT
LYWSHVQSEE EALYLTGLLN SEAVCLVIKE FQPRGAFGER HIHKLPIGAT PPYNPMDIVH
IEVVATTKQL MVDWDNFKKS IPDEIMQLLN PNSSSLSIRR RKIREKIKNL PSYPAYEQAC
RDLYGL
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