Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0243 |
Symbol | |
ID | 4017990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 276435 |
End bp | 278834 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637954225 |
Product | RNA binding S1 |
Protein accession | YP_561262 |
Protein GI | 91791611 |
COG category | [K] Transcription |
COG ID | [COG2183] Transcriptional accessory protein |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTCTA CATCTCAGAC TATTGCCCAG ATCATCGCTC AGGAACTCAA TGTCCGTGAG CAACAAGTGA TGGCGACTAT TGCCTTGCTA GACGAAGGCT CGACCGTTCC TTTTATCGCG CGCTATCGTA AAGAGGCCAC CGGCGGCTTA GATGATACTC AGCTGCGTAA CTTATACAGC CGTTTAGGAT ATTTGCGCGA GCTTAATGAT CGCCGTCAAG TGGTGCTGTC GAGTATTAAA GCTCAAGATA AGCTCACCCC AGCCTTAGAG CATGAGATAA ATCAGGCGGA CAGTAAAACC CGCCTCGAAG ACTTGTATTT ACCCTTTAAA CCAAAGCGCC GTACCAAGGG CATGATTGCC ATCGAAGCTG GGCTGGAGCC TTTGGCGGAT TTTCTGCTGG CTAATCGCAA TGCAGATATC GACGCAAAAG CCGCTGAATT TATTAATTCT GCTGCGGGCT TTAGCGATGA GAAAGCTGTG CTCGAAGGCG CACGTTATAT CTTGATGGAA CGCTTCGCCG AAGATGCTGA ACTTATTCGC AAAGTACGTA GTCACCTTGC CCAGCATGCG GTGCTGGAAA GTAAGGTGAT GAAAGGCAAA GAAAAAGAAG GGTCAAAATT CCGCGATTAT TTTGAGCATA CAGAAGCCCT TCATAAGGTG CCCTCTCACC GTGCGCTCGC CATGCTACGT GGCCGCAATG AAAGCATGTT AAGTTTATCG ATGAATGCCG ACCCTGATAC TCAGGCTATC GATGGCAGTT ATTGCGAGGT GATTATCGCC GATCATTTCA ACTTGAAGTT GAGCGATACT AGTGTCGATG CTTGGCTTAA AACTGTGGTG ACTGCGACTT GGCGCATCAA GATTGCGCTG CAAATGGAAA ATGAAATGAT TTCCCAGATG CGTGAGCGCG CCGAAGAAGA AGCCATTAAA GTCTTCGCCC GTAATCTTGG CGATCTATTG ATGGCGCCAC CTGCAGGGGC GAAAGCCACC ATGGGACTAG ATCCTGGCCT TAGAACCGGA GTCAAAGTCG CGATAGTGGA TAACACAGGT AAATTTGTGG CTCATACTGT GATTTACCCC CATGCGCCGC AAAATGTGTG GGACAAATCC ATTCGCACCT TGGCTAATCT TGTGAATATG CACAAGGTTG AGCTTATTGC CATAGGTAAC GGCACAGCAT CACGGGAAAC TGATAAGTTG GCAGGCGAAG TCATCGCAAG CCTTAAAGAC ACCCACCCAA ATCTAACTAA AATTATGGTC AGCGAAGCGG GCGCCTCTGT GTATTCGGCC TCCGAGCTTG CGGCTGAAGA ATTCCCTAAC TTAGATGTGT CTATTCGCGG CGCCGTGTCT ATTGCTCGCC GCCTGCAAGA CCCGCTTGCC GAGTTGGTCA AAATTGAGCC TAAGTCTATT GGTGTGGGTC AATATCAGCA CGATGTGAGT CAGAGTCAGT TGTCATCATC CTTGGATGCG GTGATCGAAG ACTGCGTGAA CGGCGTCGGT GTGGATCTCA ATATGGCCTC GGCGCCATTG CTGGCACAGG TTGCGGGCTT AAATAAAACC TTGGCGAAGA ATCTCGTAGA TTACCGTGAT GAGCACGGCC AATTTACTAA CCGTAAGCAA CTGCTCAAAG TGGCACGCCT CGGGCCTAAA GCCTTTGAGC AGGCGGCAGG CTTCTTGCGT ATTCGCGGGG GTGATAACCC CTTAGATGCC TCATCAGTCC ATCCTGAAGC GTATAAATTA GTGGAAACCA TAGCCCAAAA GACCCAGCAA GCCATAGACA GCCTGATTGG CAATAGCGGT TTACTGTCTA GTATCAAAGC CGAAGATTTT GTCAGCGATG AATTTGGTTT GCCGACCATC AATGACATCT TGGCCGAGCT TGATAAACCA GGGCGCGACC CTCGCGGCGA GTTTAAGACT GCAAGCTTTA AAGAGGGTGT TGAAGAGCTG AAGGACTTAA AGCCTGAGAT GATTTTAGAA GGTGTGGTCA CTAATGTGAC TAACTTTGGT GCTTTTGTTG ATGTGGGTGT ACATCAAGAC GGTTTAGTGC ATATTTCATC CTTAACTGAC AAATTTGTTA GCGATCCGCA CACTATAGTC AAAGCTGGCG ATGTGGTTAA AGTTAAAGTG ATGGAAGTGG ACATTGAGCG CCGCCGTATT GGCCTAAGCA TGCGTCTGGA TGAGGCCATT AATACCAGCG CTAGCAGCGT GAAGCCTAAG CAAGATAATC GTGGCAGTGC TGCGAATAAA ACGAGCACTA ACACAGGCAT TACCAACAAA GGTGCGAGCG CTAATAACGG GAAACCTACC GGCAGAAAAG CGCCTGCGCC CAAAGCGGCC CCTGCTAACG CAGCTATGGG CAACGCCTTC GCTGATGCCT TTGCAAAAAT GAAGAAATAA
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Protein sequence | MHSTSQTIAQ IIAQELNVRE QQVMATIALL DEGSTVPFIA RYRKEATGGL DDTQLRNLYS RLGYLRELND RRQVVLSSIK AQDKLTPALE HEINQADSKT RLEDLYLPFK PKRRTKGMIA IEAGLEPLAD FLLANRNADI DAKAAEFINS AAGFSDEKAV LEGARYILME RFAEDAELIR KVRSHLAQHA VLESKVMKGK EKEGSKFRDY FEHTEALHKV PSHRALAMLR GRNESMLSLS MNADPDTQAI DGSYCEVIIA DHFNLKLSDT SVDAWLKTVV TATWRIKIAL QMENEMISQM RERAEEEAIK VFARNLGDLL MAPPAGAKAT MGLDPGLRTG VKVAIVDNTG KFVAHTVIYP HAPQNVWDKS IRTLANLVNM HKVELIAIGN GTASRETDKL AGEVIASLKD THPNLTKIMV SEAGASVYSA SELAAEEFPN LDVSIRGAVS IARRLQDPLA ELVKIEPKSI GVGQYQHDVS QSQLSSSLDA VIEDCVNGVG VDLNMASAPL LAQVAGLNKT LAKNLVDYRD EHGQFTNRKQ LLKVARLGPK AFEQAAGFLR IRGGDNPLDA SSVHPEAYKL VETIAQKTQQ AIDSLIGNSG LLSSIKAEDF VSDEFGLPTI NDILAELDKP GRDPRGEFKT ASFKEGVEEL KDLKPEMILE GVVTNVTNFG AFVDVGVHQD GLVHISSLTD KFVSDPHTIV KAGDVVKVKV MEVDIERRRI GLSMRLDEAI NTSASSVKPK QDNRGSAANK TSTNTGITNK GASANNGKPT GRKAPAPKAA PANAAMGNAF ADAFAKMKK
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