Gene Sden_0230 details

Gene Information

• Locus tag: Sden_0230
• ID: 4017950
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 256639
• End bp: 257256
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637954206
• Product: DNA-binding transcriptional repressor FabR
• Protein accession: YP_561250
• Protein GI: 91791599

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000000000220471
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTGTTA GAGCGCAGCA GAAAGAAAAA ACCCGTCGCG CCTTGGTTGA TGCAGCTTTT 
AATCAGCTCA GTGCAGAACG TAGCTTTTCC AGTTTGAGCC TTCGAGAAGT TGCAAGAGAA 
GCGGGTATAG CGCCGACCTC ATTTTACCGC CACTTTAAAG ACATGAACGA GCTTGGATTG 
ACCATGGTCG ACGAAGGCGG GTTAACCTTA AGGCAGATGA TGCGTAAAGG TCGCCAGCGG 
GCTGAAGCCG GGGGCAGCGT GATCCGTATT TCTGTGGACA CCTTTATGGA AGTCTTAGAG 
TCGAATCCAA ACGTGTTTAG GATCTTGCTT CATGAGCGTT CGGGTACCTC TGCGGCATTT 
AGAGCGGCGG TTGAACGAGA GATTGAGCAT TTTATTTCTG AACTTGCCCA TTACACCGAA 
GCGAATGCTA AGCGCAATCC TTTGTTGGCA AGGGCGCAAG CCGAGGCTTT AGTGATCTTA 
GTATTTAATG CGGGCGCAAC GGCACTGGAT CTTAAGCGCA GCGAGCGTAA GTTATTGGCC 
GACCAGTTGG TGTTGCAATT GCGTATGGTG GCAACAGGCG CCGAAGCTTT ACAGCACAAG 
ATGGATAGCC GAGGTTAG 

 

Protein sequence

MGVRAQQKEK TRRALVDAAF NQLSAERSFS SLSLREVARE AGIAPTSFYR HFKDMNELGL 
TMVDEGGLTL RQMMRKGRQR AEAGGSVIRI SVDTFMEVLE SNPNVFRILL HERSGTSAAF 
RAAVEREIEH FISELAHYTE ANAKRNPLLA RAQAEALVIL VFNAGATALD LKRSERKLLA 
DQLVLQLRMV ATGAEALQHK MDSRG