| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0149 |
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| Symbol | |
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| ID | 4020396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 169214 |
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| End bp | 170710 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954122 |
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| Product | Sodium/proline symporter |
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| Protein accession | YP_561169 |
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| Protein GI | 91791518 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGATGT TAACTTATGT ATCCCTAGGA TTGTATTTCG TGGTCATGTT GGCCATAGGT
TTATTTGCTT ATCGCCGTTC TACCAGTGAC GTGTCTGGCT ATATTCTTGG CGGCCGTCAG
GTGAGCCCAC AAGTGACTGC ATTGTCGGCG GGCGCGTCTG ATATGAGCGG CTGGATGTTG
ATGGGTCTGC CTGGTGCCAT GTTCTTGGTG GGATTTGAGA CGATTTATAT CGCCGTTGGC
CTGCTTATTG GTGCCTTGGT GAATTATCTT ATTGTTGCCC CTAAACTTAG GGTCTACACA
GAGGTTGCTC ATAACTCGCT GACAATCCCT GAGTTTTTTG CCAAGCGCTT CAACGCGCCT
AACAGCAATA TACGCATAGT GGCGGCGGTC ATTATCGTAG TGTTCTTTAC TTTATATACC
TCAGCGGGCC TAGTGGCTGG CGGCAAGTTG TTTGAATCTG CTTTTAATCT GAATTATGAG
CTGGGTTTGA TCGTGACCTT AGGCGTGGTG GTGTCTTACA CCTTGCTAGG CGGCTTCTTA
GCCGTGAGCC TGACGGACTT TGTTCAGGGT TGCATCATGT TTGTTGCCCT CATCTTAGTG
CCTGTGGTGG CCTTTCAAGA GTTTAGCAGT GCGGATAAGA TGATGGATTT TGCGTATCAG
TCGATTCCGC ATTTCTCTGA AGGCATGCAA AATGTCACCA TGTTGGGATT GATCTCAAGC
CTGTCATGGG GCCTTGGCTA TTTTGGCCAG CCACATATCA TAGTGCGCTT TATGGCTATT
CGTTCTGTGA GCGATGTGAA AATTGCCAGA CGCATAGGCA TGAGCTGGAT GACAGTGACC
ATAGTCGGTG CGTTAGCGAC GGGTCTTGTG GGCATAGCCT ACGCCAACAA ATTTGAAATG
ACCTTAACCG ACCCAGAAAC CATCTTTATT GTATTTTCTG AGTTGTTGTT CCACCCACTG
ATTAGTGGCT TCTTATTGGC AGCCATTCTA GCGGCCATCA TGAGCACGAT TTCCAGCCAG
TTATTGGTGT CATCGAGCTC ATTGACAGAA GACATCTACC GCGTGATGTC TAATAAAGAA
GCCAGTGAAA AAGACATGGT TAAGCTAGGG CGTTTCGGTG TGGCTGGGGT GGGTATTGTC
GCCAGTCTGT TAGCGCTTGA TCGCAGCAAT AGCATTTTAT CCCTAGTGAG TAACGCTTGG
GCAGGCTTTG GTGCCGCCTT CGGTCCGCTA GTGTTATTTA GCCTCTACAA GGCGAACTTA
ACCCACAAGG CGGCGATGGC GGGCATTATA TCGGGTGCAG TGACTGTACT GTTTTGGATC
TACGCCCCAG TGCTTGCCGA TGGCAATAGT TTAACCAGCA TAATGTACGA AATGATCCCA
GGATTTGTAG TCAGCAGCGT AGTGATTTGG GTAGTTTCAT ACTTAGATAG TGCACCTTGC
GAACAAACCA CAGAATTGTT TCATGAAGCC GGCCGTGTCA TGGCCGAGCA AAAATAA
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| Protein sequence | MPMLTYVSLG LYFVVMLAIG LFAYRRSTSD VSGYILGGRQ VSPQVTALSA GASDMSGWML
MGLPGAMFLV GFETIYIAVG LLIGALVNYL IVAPKLRVYT EVAHNSLTIP EFFAKRFNAP
NSNIRIVAAV IIVVFFTLYT SAGLVAGGKL FESAFNLNYE LGLIVTLGVV VSYTLLGGFL
AVSLTDFVQG CIMFVALILV PVVAFQEFSS ADKMMDFAYQ SIPHFSEGMQ NVTMLGLISS
LSWGLGYFGQ PHIIVRFMAI RSVSDVKIAR RIGMSWMTVT IVGALATGLV GIAYANKFEM
TLTDPETIFI VFSELLFHPL ISGFLLAAIL AAIMSTISSQ LLVSSSSLTE DIYRVMSNKE
ASEKDMVKLG RFGVAGVGIV ASLLALDRSN SILSLVSNAW AGFGAAFGPL VLFSLYKANL
THKAAMAGII SGAVTVLFWI YAPVLADGNS LTSIMYEMIP GFVVSSVVIW VVSYLDSAPC
EQTTELFHEA GRVMAEQK
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