Gene Sden_0108 details

Gene Information

• Locus tag: Sden_0108
• ID: 4017172
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 119777
• End bp: 120307
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637954081
• Product: hypothetical protein
• Protein accession: YP_561128
• Protein GI: 91791477

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000003316
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTCGTA ATCTGTTTAT TTTTCTCGCC TTTTCCATTA ACTCCTTCAA CGTATTGGCG 
GCGCCCAGCA TGTACCAGGT GCTCTCTGAG GGGGAATACC AAACGCCTAT TTCAGTGATG 
AAACAGCTAG AGGCCAATAA AGGTGACATG ATCGTTGCGT TTGACATGGA AATCGAAGCG 
GATGAATTAA TATATGAATT CGTGATAGTC AATTTAGTGA AGCAGCAGTT GATTGAGACT 
CGAATACGGG CCAAAGATGG CGCTAAACTC AAAGACAGCA GTAAAACTAT TGCCGCCGAT 
GATTTAGACC AAGTGCAAGC GGTGAAAATG TTGCAAAGGA AGCAGCTTAG TTTTTCTGAT 
TTGGTCAGTA TGGCCATGAA AGACAAGCCA GGGTTTTTAT TGGAAGCCGA ATTAGATCAT 
GATTTGGCGA TAAGCTACTT AGAGCTTAAA TTGCTCACTG AAATGAGTAA ACACACTGTC 
GCCTTCGATA TCGACAATTT GCGCCCATTA CCTCTGCTCA AATGGGACTA A 

 

Protein sequence

MFRNLFIFLA FSINSFNVLA APSMYQVLSE GEYQTPISVM KQLEANKGDM IVAFDMEIEA 
DELIYEFVIV NLVKQQLIET RIRAKDGAKL KDSSKTIAAD DLDQVQAVKM LQRKQLSFSD 
LVSMAMKDKP GFLLEAELDH DLAISYLELK LLTEMSKHTV AFDIDNLRPL PLLKWD