| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0085 |
|---|
| Symbol | |
|---|
| ID | 4017133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 94806 |
|---|
| End bp | 95330 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637954058 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_561105 |
|---|
| Protein GI | 91791454 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.352391 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACTC TTTTACGTCT CGGAGCCGCT TCGCTGCTGG CGCTTGCCAT GACAGCACAG
GCCGCCGACA TAGGTAAATT TACCCTAGAA AATGGCGCAG AAGTCTTACT GAAAGATGAC
TTCACATGGG AGTATATTGT GGTTGAGCAG GCCAGCCAAA CCTTAGCCCC CATAGTACTG
GCGCAGCCAG AGCTACTGAC GACCACAGCC AAAGATGGCA TCAAAATCAG CCTAGCCAGC
AGCACCTGGG ATGGCGACCG TCTTGGATTA ACCTTGAATT TGTCCAGCAG CAGTAGTGAC
CATATAGTGT TCGTCGAAGT GGCCGCCAAG TTTTTCTCAG ACTCAGGCCA AGTGCTTAAA
ACAGAAACTT TGGAAGCTTG GAAGGCCACC TTCCGTCAGC CAGAAACCTA CCTTCGTAAA
GGTGAACAAC GTCAGAGCCG TACCCTTTGG GTAGAAGGCA TAGATAAATC CCAGTGGCAG
AAGCAATTGC TCCAGCTGAG CATTAGCGAA TTGAAATCTC GCTAA
|
|---|
| Protein sequence | MTTLLRLGAA SLLALAMTAQ AADIGKFTLE NGAEVLLKDD FTWEYIVVEQ ASQTLAPIVL
AQPELLTTTA KDGIKISLAS STWDGDRLGL TLNLSSSSSD HIVFVEVAAK FFSDSGQVLK
TETLEAWKAT FRQPETYLRK GEQRQSRTLW VEGIDKSQWQ KQLLQLSISE LKSR
|
|---|
| |