| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0072 |
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| Symbol | |
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| ID | 4017195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 79325 |
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| End bp | 81118 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954045 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_561092 |
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| Protein GI | 91791441 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTAG CGCAATATCA TCTCGTTCAA CTCCTACAGC AGCAGAGCCA ACAGCGTGCA
GATAGCATAG CGCTTGAGGG GTTTGAATTG GCTGCGCCTT GGGACAGGGT AAGTTGGAAA
GCTTTTGATA GCATCAGCCA TCAAGTGGCC AAAGCCATGA TAAAGTTTGG TCTTCAAGCA
CAAGATACCG CCGTTATCCT GTCGCAAAAT TGCCCCCAAT GGACCTGCGC CGACATCGGC
TTGCTAAAGG CGCGCGCCAT AGTCGTGCCT GTGTACCCAA GCAGTACCCA AGAGCAGGCA
AGCTTCATCA TCAATGATGC TGGCGCTAAG GTGCTATTTG TTGATGATGC CGAACAATAT
CATATGGCGT GTAAATTACA GGCTGTGTGT CCAAGTGTTG AATACCTAGT GGTATTCGAT
GCCAATGTGC CCTTGCTAGA CACCCCAAAT CACTTGCATT TTGACAGCCT AATAACCGAA
GATTTAAGCG CCCAAGACAG GGCGTTAACT GAGCGTTTAC AGGCGGCCAA TCTGGATGAC
TTGTTAACCC TGATTTATAC CTCTGGTACC ACGGGGGATC CCAAAGGCGT GATGCTAGAT
TATCGTAATA TGGCCTCGAC CATACGCCAG CACGATACCT GTTTGAACTT CAATCCCGGT
GACACTTCGC TAGCCTTCTT GCCGTTAAGC CATGTGTTTG AGCGCAGTTG GAGCTTCTTT
GCCTTATGTC GTGGTGGCCG AAATGTGTAT TTGAAAGATA CGATGAAAAT CAAAGAAGCC
ATAGTGGCCG TGCGTCCTCA TACCTTGTGT GTGGTGCCAA GATTTTTAGA AAAAGTCTAT
AGCGCAGTGC AAGACAAGGT CTCTAAAGCC CCCAAATCCA GACAGAGATT ATTTCACTGG
GCCATGGCTG CGGGCCAGCG GCAATTCGAG GTCAATCAAG GTCGCGCAAA AACCAGTGCC
ATCTTGAGTC TGCAATGGGT CGTGGCTAAC AAATTGGTGT TCAGTAAGTT ACAAGCCGTT
TTAGGTGGGA GGCTTAAATT TATGCCTTGC GGCGGCGCCG CCTTAGACAT GACAGTGGGT
AACTTCTTTC ATGGCATTAA CTTGCCTGTG CTGTGTGGTT ACGGCATGAC AGAGACTAAT
GCCACAGTGA CCATGAACAC ACTTAATAAC CGAGTGCCAG GCTCTAACGG TAAGCCATTG
CCTGAGACAG AAGTAAAGCT TGGTGCTTTT GATGAGATCA TGGTGCGTGG CGATGCTGTG
ATGCGCGGTT ATTACAAACG TCCCGACGAC ACGGCTGCCA CATTTGAAGA TGGCTGGTTA
AAAACCGGCG ATGCGGGGCG TTTCGATGAG CAGGGTAACT TGTTTATTAC TGACCGCATC
AAAGAATTGA TGAAAACCTC CAATGGCAAA TACATAGCGC CTCAGCGAGT CGAAGGTAAA
GTGGGTTCTT GCCCCTTTAT TGAGCAAGTT GCCATCATAG CCGATGGGCG TAATTTTGTG
TCGGCGTTAA TCGTGCCGTC ATTTGAGGCA TTAGAATATT GGGCCAAAGA GCAAGGGTTA
GTGTTTGACT CGTTAGCCTC CTTGCTGGAA CGTGCTGAAG TCTTGGCCCA TTTTGAGCAG
CGCTTAATTC ATCTGCAGCA CGATTTAGCG GCGTTTGAGC AAATAAAGAA ATTTAGCCTA
TTGCCAGAAG CTTTCACCAT AGAAGCAGGC TTGATTACGC CGACATTGAA GCTACGCCGT
AAGGCGATAT ATCAAAGATA CGCCCCAGAG ATAACGGCCA TGTATGCTGG TTAA
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| Protein sequence | MSLAQYHLVQ LLQQQSQQRA DSIALEGFEL AAPWDRVSWK AFDSISHQVA KAMIKFGLQA
QDTAVILSQN CPQWTCADIG LLKARAIVVP VYPSSTQEQA SFIINDAGAK VLFVDDAEQY
HMACKLQAVC PSVEYLVVFD ANVPLLDTPN HLHFDSLITE DLSAQDRALT ERLQAANLDD
LLTLIYTSGT TGDPKGVMLD YRNMASTIRQ HDTCLNFNPG DTSLAFLPLS HVFERSWSFF
ALCRGGRNVY LKDTMKIKEA IVAVRPHTLC VVPRFLEKVY SAVQDKVSKA PKSRQRLFHW
AMAAGQRQFE VNQGRAKTSA ILSLQWVVAN KLVFSKLQAV LGGRLKFMPC GGAALDMTVG
NFFHGINLPV LCGYGMTETN ATVTMNTLNN RVPGSNGKPL PETEVKLGAF DEIMVRGDAV
MRGYYKRPDD TAATFEDGWL KTGDAGRFDE QGNLFITDRI KELMKTSNGK YIAPQRVEGK
VGSCPFIEQV AIIADGRNFV SALIVPSFEA LEYWAKEQGL VFDSLASLLE RAEVLAHFEQ
RLIHLQHDLA AFEQIKKFSL LPEAFTIEAG LITPTLKLRR KAIYQRYAPE ITAMYAG
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