Gene Sden_0048 details

Gene Information

• Locus tag: Sden_0048
• ID: 4017247
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 61062
• End bp: 61625
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637954021
• Product: flagellar L-ring protein
• Protein accession: YP_561068
• Protein GI: 91791417
• COG category: [N] Cell motility
• COG ID: [COG2063] Flagellar basal body L-ring protein

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.508164
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGTACCTA GAATATTGTT ATTATTGCTT TTTTGTTTCA CTTGTTCAGC AACGGACCTA 
GTTGAAATCG ATAAGTTAAG GGCCCTTACT GCGGATAAAA GAGCTGTAGG TATTGGTGAT 
GTTGTCACCC TATTGGTTTT TGAGGATGCA AAAGCGGGGT CAAGTGCAAA CTTAAAAGAA 
CAAGGTGAGT TTGAAATGTC TGCGGGGGCG CGAAGAAGTG ATCTCAATTG GCAGTATGGC 
TTGGGAGGGA TGTCTTCTAA TAAGGGGGAT GCGGCAACAC AGAGAAATGG CTTTATCAAA 
GCCCATGTTA CCGTTCTGGT CCAAGGTGTG GATGACTATG GATTATTTGT GGTTCAGGGA 
ATACAGAAAC TGCAAATTAA TGGTGAAGAA CAAGTTATCT CTGTGAGCGG CAAACTTCGC 
AAAGATGATA TTGCGGCCAA TAATACCGCG CTGTCATCTA GATTATTAGA TGCGAGTATT 
AGCTTTACTG GGCAAGGAAC AGTGAGTACA GGTCATGACT CTAATCTCTT TAGTCGTTTG 
TTTCGCTGGT TTGGAATATT GTAA 

 

Protein sequence

MVPRILLLLL FCFTCSATDL VEIDKLRALT ADKRAVGIGD VVTLLVFEDA KAGSSANLKE 
QGEFEMSAGA RRSDLNWQYG LGGMSSNKGD AATQRNGFIK AHVTVLVQGV DDYGLFVVQG 
IQKLQINGEE QVISVSGKLR KDDIAANNTA LSSRLLDASI SFTGQGTVST GHDSNLFSRL 
FRWFGIL